Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim50Q810I2 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim50Q810I2 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim50Q810I2 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim50Q810I2 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.99□□□□□ -0.33
Trim50Q810I2 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim50Q810I2 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim50Q810I2 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim50Q810I2 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim50Q810I2 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim50Q810I2 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim50Q810I2 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim50Q810I2 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.99□□□□□ -0.33
Trim50Q810I2 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim50Q810I2 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim50Q810I2 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim50Q810I2 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.99□□□□□ -0.33
Trim50Q810I2 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.99□□□□□ -0.33
Trim50Q810I2 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim50Q810I2 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Trim50Q810I2 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim50Q810I2 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.99□□□□□ -0.33
Trim50Q810I2 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim50Q810I2 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim50Q810I2 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim50Q810I2 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trim50Q810I2 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim50Q810I2 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim50Q810I2 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim50Q810I2 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim50Q810I2 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim50Q810I2 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim50Q810I2 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim50Q810I2 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.99□□□□□ -0.33
Trim50Q810I2 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim50Q810I2 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim50Q810I2 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trim50Q810I2 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim50Q810I2 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim50Q810I2 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim50Q810I2 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.99□□□□□ -0.33
Trim50Q810I2 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim50Q810I2 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim50Q810I2 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim50Q810I2 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim50Q810I2 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim50Q810I2 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.98□□□□□ -0.33
Trim50Q810I2 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim50Q810I2 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim50Q810I2 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim50Q810I2 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trim50Q810I2 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim50Q810I2 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim50Q810I2 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim50Q810I2 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim50Q810I2 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim50Q810I2 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim50Q810I2 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.98□□□□□ -0.33
Trim50Q810I2 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.98□□□□□ -0.33
Trim50Q810I2 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim50Q810I2 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim50Q810I2 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.98□□□□□ -0.33
Trim50Q810I2 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim50Q810I2 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim50Q810I2 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Trim50Q810I2 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim50Q810I2 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim50Q810I2 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim50Q810I2 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trim50Q810I2 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim50Q810I2 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim50Q810I2 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim50Q810I2 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim50Q810I2 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim50Q810I2 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim50Q810I2 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim50Q810I2 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim50Q810I2 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.97□□□□□ -0.33
Trim50Q810I2 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim50Q810I2 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim50Q810I2 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim50Q810I2 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim50Q810I2 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim50Q810I2 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim50Q810I2 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.97□□□□□ -0.33
Trim50Q810I2 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim50Q810I2 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trim50Q810I2 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim50Q810I2 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim50Q810I2 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim50Q810I2 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim50Q810I2 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trim50Q810I2 Gm15678-201ENSMUST00000117573 960 ntBASIC12.97□□□□□ -0.33
Trim50Q810I2 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Trim50Q810I2 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim50Q810I2 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.97□□□□□ -0.33
Trim50Q810I2 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim50Q810I2 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim50Q810I2 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trim50Q810I2 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms