Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
Ush1gQ80T11 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ush1gQ80T11 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ush1gQ80T11 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ush1gQ80T11 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ush1gQ80T11 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC14.58□□□□□ -0.08
Ush1gQ80T11 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ush1gQ80T11 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.58□□□□□ -0.08
Ush1gQ80T11 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ush1gQ80T11 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ush1gQ80T11 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC14.58□□□□□ -0.08
Ush1gQ80T11 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ush1gQ80T11 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ush1gQ80T11 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ush1gQ80T11 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ush1gQ80T11 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ush1gQ80T11 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ush1gQ80T11 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ush1gQ80T11 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ush1gQ80T11 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ush1gQ80T11 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ush1gQ80T11 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ush1gQ80T11 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ush1gQ80T11 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ush1gQ80T11 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ush1gQ80T11 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ush1gQ80T11 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ush1gQ80T11 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.57□□□□□ -0.08
Ush1gQ80T11 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ush1gQ80T11 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ush1gQ80T11 Gm27501-201ENSMUST00000183599 107 ntBASIC14.57□□□□□ -0.08
Ush1gQ80T11 Gm7783-201ENSMUST00000204795 781 ntBASIC14.57□□□□□ -0.08
Ush1gQ80T11 Gm17823-201ENSMUST00000217830 1006 ntBASIC14.57□□□□□ -0.08
Ush1gQ80T11 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC14.57□□□□□ -0.08
Ush1gQ80T11 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ush1gQ80T11 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ush1gQ80T11 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ush1gQ80T11 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ush1gQ80T11 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ush1gQ80T11 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ush1gQ80T11 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ush1gQ80T11 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ush1gQ80T11 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ush1gQ80T11 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ush1gQ80T11 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ush1gQ80T11 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.56□□□□□ -0.08
Ush1gQ80T11 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.56□□□□□ -0.08
Ush1gQ80T11 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
Ush1gQ80T11 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ush1gQ80T11 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ush1gQ80T11 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ush1gQ80T11 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ush1gQ80T11 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Ush1gQ80T11 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ush1gQ80T11 Gm11400-201ENSMUST00000120853 1214 ntBASIC14.56□□□□□ -0.08
Ush1gQ80T11 Gm13342-201ENSMUST00000121055 207 ntBASIC14.56□□□□□ -0.08
Ush1gQ80T11 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC14.56□□□□□ -0.08
Ush1gQ80T11 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Ush1gQ80T11 Gm2824-203ENSMUST00000226189 1228 ntBASIC14.56□□□□□ -0.08
Ush1gQ80T11 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ush1gQ80T11 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Ush1gQ80T11 Gm10268-201ENSMUST00000085340 555 ntBASIC14.56□□□□□ -0.08
Ush1gQ80T11 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.56□□□□□ -0.08
Ush1gQ80T11 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ush1gQ80T11 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ush1gQ80T11 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ush1gQ80T11 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.56□□□□□ -0.08
Ush1gQ80T11 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ush1gQ80T11 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Ush1gQ80T11 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ush1gQ80T11 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Ush1gQ80T11 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.56□□□□□ -0.08
Ush1gQ80T11 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ush1gQ80T11 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ush1gQ80T11 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ush1gQ80T11 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC14.55□□□□□ -0.08
Ush1gQ80T11 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ush1gQ80T11 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ush1gQ80T11 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ush1gQ80T11 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ush1gQ80T11 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
Ush1gQ80T11 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Ush1gQ80T11 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Ush1gQ80T11 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Ush1gQ80T11 Gm13886-201ENSMUST00000117876 1183 ntBASIC14.55□□□□□ -0.08
Ush1gQ80T11 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC14.55□□□□□ -0.08
Ush1gQ80T11 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC14.55□□□□□ -0.08
Ush1gQ80T11 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ush1gQ80T11 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC14.55□□□□□ -0.08
Ush1gQ80T11 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ush1gQ80T11 Gm27516-201ENSMUST00000184237 98 ntBASIC14.55□□□□□ -0.08
Ush1gQ80T11 Gm43118-201ENSMUST00000199149 775 ntBASIC14.55□□□□□ -0.08
Ush1gQ80T11 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ush1gQ80T11 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ush1gQ80T11 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ush1gQ80T11 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.55□□□□□ -0.08
Ush1gQ80T11 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Ush1gQ80T11 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ush1gQ80T11 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ush1gQ80T11 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms