Protein–RNA interactions for Protein: Q7TNH6

Nphp3, Nephrocystin-3, mousemouse

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp3Q7TNH6 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nphp3Q7TNH6 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nphp3Q7TNH6 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nphp3Q7TNH6 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nphp3Q7TNH6 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nphp3Q7TNH6 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nphp3Q7TNH6 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nphp3Q7TNH6 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nphp3Q7TNH6 Gm10327-201ENSMUST00000105222 1002 ntBASIC16.17■□□□□ 0.18
Nphp3Q7TNH6 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC16.17■□□□□ 0.18
Nphp3Q7TNH6 Gm11618-201ENSMUST00000117946 267 ntBASIC16.17■□□□□ 0.18
Nphp3Q7TNH6 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
Nphp3Q7TNH6 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nphp3Q7TNH6 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nphp3Q7TNH6 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC16.17■□□□□ 0.18
Nphp3Q7TNH6 AC173210.1-201ENSMUST00000222341 1131 ntBASIC16.17■□□□□ 0.18
Nphp3Q7TNH6 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nphp3Q7TNH6 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC16.17■□□□□ 0.18
Nphp3Q7TNH6 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Nphp3Q7TNH6 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nphp3Q7TNH6 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC16.17■□□□□ 0.18
Nphp3Q7TNH6 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Nphp3Q7TNH6 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC16.16■□□□□ 0.18
Nphp3Q7TNH6 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nphp3Q7TNH6 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nphp3Q7TNH6 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nphp3Q7TNH6 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nphp3Q7TNH6 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nphp3Q7TNH6 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Nphp3Q7TNH6 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nphp3Q7TNH6 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nphp3Q7TNH6 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nphp3Q7TNH6 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nphp3Q7TNH6 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Nphp3Q7TNH6 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nphp3Q7TNH6 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Nphp3Q7TNH6 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Nphp3Q7TNH6 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nphp3Q7TNH6 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC16.16■□□□□ 0.18
Nphp3Q7TNH6 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nphp3Q7TNH6 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nphp3Q7TNH6 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC16.16■□□□□ 0.18
Nphp3Q7TNH6 Gm13123-201ENSMUST00000122173 492 ntBASIC16.16■□□□□ 0.18
Nphp3Q7TNH6 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Nphp3Q7TNH6 Gm37497-201ENSMUST00000195830 798 ntBASIC16.16■□□□□ 0.18
Nphp3Q7TNH6 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC16.16■□□□□ 0.18
Nphp3Q7TNH6 Gm9299-201ENSMUST00000206392 1140 ntBASIC16.16■□□□□ 0.18
Nphp3Q7TNH6 AC122305.4-201ENSMUST00000216159 1206 ntBASIC16.16■□□□□ 0.18
Nphp3Q7TNH6 AC153962.4-201ENSMUST00000217878 242 ntBASIC16.16■□□□□ 0.18
Nphp3Q7TNH6 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Nphp3Q7TNH6 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nphp3Q7TNH6 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nphp3Q7TNH6 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nphp3Q7TNH6 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nphp3Q7TNH6 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nphp3Q7TNH6 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Nphp3Q7TNH6 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nphp3Q7TNH6 Gm9924-202ENSMUST00000192760 2311 ntBASIC16.15■□□□□ 0.18
Nphp3Q7TNH6 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nphp3Q7TNH6 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nphp3Q7TNH6 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nphp3Q7TNH6 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nphp3Q7TNH6 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nphp3Q7TNH6 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Nphp3Q7TNH6 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nphp3Q7TNH6 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nphp3Q7TNH6 Grk6-205ENSMUST00000224653 2976 ntBASIC16.15■□□□□ 0.18
Nphp3Q7TNH6 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nphp3Q7TNH6 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nphp3Q7TNH6 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nphp3Q7TNH6 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nphp3Q7TNH6 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Nphp3Q7TNH6 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nphp3Q7TNH6 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nphp3Q7TNH6 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC16.15■□□□□ 0.18
Nphp3Q7TNH6 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nphp3Q7TNH6 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nphp3Q7TNH6 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nphp3Q7TNH6 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC16.15■□□□□ 0.18
Nphp3Q7TNH6 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC16.15■□□□□ 0.18
Nphp3Q7TNH6 Snora78-201ENSMUST00000158630 128 ntBASIC16.15■□□□□ 0.18
Nphp3Q7TNH6 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nphp3Q7TNH6 Gm27731-201ENSMUST00000185192 107 ntBASIC16.15■□□□□ 0.18
Nphp3Q7TNH6 Gm37922-201ENSMUST00000195596 455 ntBASIC16.15■□□□□ 0.18
Nphp3Q7TNH6 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nphp3Q7TNH6 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nphp3Q7TNH6 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Nphp3Q7TNH6 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
Nphp3Q7TNH6 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nphp3Q7TNH6 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Nphp3Q7TNH6 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nphp3Q7TNH6 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC16.14■□□□□ 0.17
Nphp3Q7TNH6 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nphp3Q7TNH6 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC16.14■□□□□ 0.17
Nphp3Q7TNH6 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nphp3Q7TNH6 Gm23931-201ENSMUST00000103842 109 ntBASIC16.14■□□□□ 0.17
Nphp3Q7TNH6 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC16.14■□□□□ 0.17
Nphp3Q7TNH6 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nphp3Q7TNH6 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC16.14■□□□□ 0.17
Nphp3Q7TNH6 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms