Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Gm1821-202ENSMUST00000227415 750 ntBASIC11.23□□□□□ -0.61
Rif1Q6PR54 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC11.23□□□□□ -0.61
Rif1Q6PR54 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Rif1Q6PR54 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.22□□□□□ -0.61
Rif1Q6PR54 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rif1Q6PR54 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rif1Q6PR54 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rif1Q6PR54 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rif1Q6PR54 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rif1Q6PR54 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rif1Q6PR54 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rif1Q6PR54 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rif1Q6PR54 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rif1Q6PR54 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rif1Q6PR54 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rif1Q6PR54 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rif1Q6PR54 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Rif1Q6PR54 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC11.22□□□□□ -0.61
Rif1Q6PR54 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC11.22□□□□□ -0.61
Rif1Q6PR54 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC11.22□□□□□ -0.61
Rif1Q6PR54 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rif1Q6PR54 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC11.22□□□□□ -0.61
Rif1Q6PR54 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC11.22□□□□□ -0.61
Rif1Q6PR54 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rif1Q6PR54 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Rif1Q6PR54 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Rif1Q6PR54 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rif1Q6PR54 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Rif1Q6PR54 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rif1Q6PR54 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rif1Q6PR54 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rif1Q6PR54 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC11.22□□□□□ -0.61
Rif1Q6PR54 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC11.22□□□□□ -0.61
Rif1Q6PR54 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rif1Q6PR54 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rif1Q6PR54 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.22□□□□□ -0.61
Rif1Q6PR54 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rif1Q6PR54 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rif1Q6PR54 Gm14608-201ENSMUST00000120030 1553 ntBASIC11.22□□□□□ -0.61
Rif1Q6PR54 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Rif1Q6PR54 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rif1Q6PR54 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rif1Q6PR54 Gm15432-201ENSMUST00000121106 195 ntBASIC11.21□□□□□ -0.61
Rif1Q6PR54 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rif1Q6PR54 Gm4868-201ENSMUST00000164138 789 ntBASIC11.21□□□□□ -0.61
Rif1Q6PR54 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.21□□□□□ -0.61
Rif1Q6PR54 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC11.21□□□□□ -0.61
Rif1Q6PR54 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rif1Q6PR54 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rif1Q6PR54 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Rif1Q6PR54 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rif1Q6PR54 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Rif1Q6PR54 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Rif1Q6PR54 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rif1Q6PR54 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rif1Q6PR54 Gm9347-201ENSMUST00000211473 1607 ntBASIC11.21□□□□□ -0.61
Rif1Q6PR54 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rif1Q6PR54 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rif1Q6PR54 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rif1Q6PR54 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.21□□□□□ -0.61
Rif1Q6PR54 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Rif1Q6PR54 Gm6159-201ENSMUST00000191249 1724 ntBASIC11.21□□□□□ -0.61
Rif1Q6PR54 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rif1Q6PR54 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Rif1Q6PR54 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Rif1Q6PR54 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rif1Q6PR54 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Rif1Q6PR54 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rif1Q6PR54 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.21□□□□□ -0.61
Rif1Q6PR54 Gm35960-201ENSMUST00000202712 767 ntBASIC11.21□□□□□ -0.61
Rif1Q6PR54 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Rif1Q6PR54 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Rif1Q6PR54 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC11.21□□□□□ -0.61
Rif1Q6PR54 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Rif1Q6PR54 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Rif1Q6PR54 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Rif1Q6PR54 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC11.21□□□□□ -0.62
Rif1Q6PR54 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Rif1Q6PR54 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Rif1Q6PR54 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Rif1Q6PR54 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Rif1Q6PR54 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rif1Q6PR54 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rif1Q6PR54 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Rif1Q6PR54 Gm12882-201ENSMUST00000121696 517 ntBASIC11.2□□□□□ -0.62
Rif1Q6PR54 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC11.2□□□□□ -0.62
Rif1Q6PR54 Gm15881-201ENSMUST00000148792 942 ntBASIC11.2□□□□□ -0.62
Rif1Q6PR54 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC11.2□□□□□ -0.62
Rif1Q6PR54 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rif1Q6PR54 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Rif1Q6PR54 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Rif1Q6PR54 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Rif1Q6PR54 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rif1Q6PR54 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rif1Q6PR54 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rif1Q6PR54 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rif1Q6PR54 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Rif1Q6PR54 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Rif1Q6PR54 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Rif1Q6PR54 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms