Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC20.14■□□□□ 0.81
Slx4Q6P1D7 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Slx4Q6P1D7 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
Slx4Q6P1D7 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC20.14■□□□□ 0.81
Slx4Q6P1D7 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slx4Q6P1D7 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC20.14■□□□□ 0.81
Slx4Q6P1D7 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slx4Q6P1D7 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Slx4Q6P1D7 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slx4Q6P1D7 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slx4Q6P1D7 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC20.14■□□□□ 0.81
Slx4Q6P1D7 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slx4Q6P1D7 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Slx4Q6P1D7 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
Slx4Q6P1D7 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slx4Q6P1D7 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slx4Q6P1D7 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Slx4Q6P1D7 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slx4Q6P1D7 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slx4Q6P1D7 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Slx4Q6P1D7 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Slx4Q6P1D7 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slx4Q6P1D7 Gm23363-201ENSMUST00000175024 79 ntBASIC20.13■□□□□ 0.81
Slx4Q6P1D7 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Slx4Q6P1D7 Gm45219-201ENSMUST00000205602 465 ntBASIC20.13■□□□□ 0.81
Slx4Q6P1D7 Gm5639-201ENSMUST00000122305 2403 ntBASIC20.13■□□□□ 0.81
Slx4Q6P1D7 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slx4Q6P1D7 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Slx4Q6P1D7 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slx4Q6P1D7 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slx4Q6P1D7 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC20.13■□□□□ 0.81
Slx4Q6P1D7 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Slx4Q6P1D7 Gm28386-201ENSMUST00000189147 1849 ntBASIC20.13■□□□□ 0.81
Slx4Q6P1D7 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slx4Q6P1D7 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slx4Q6P1D7 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Slx4Q6P1D7 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slx4Q6P1D7 Gm12266-201ENSMUST00000120311 962 ntBASIC20.12■□□□□ 0.81
Slx4Q6P1D7 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC20.12■□□□□ 0.81
Slx4Q6P1D7 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC20.12■□□□□ 0.81
Slx4Q6P1D7 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slx4Q6P1D7 AC125486.1-201ENSMUST00000218701 320 ntBASIC20.12■□□□□ 0.81
Slx4Q6P1D7 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Slx4Q6P1D7 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC20.12■□□□□ 0.81
Slx4Q6P1D7 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slx4Q6P1D7 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slx4Q6P1D7 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slx4Q6P1D7 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slx4Q6P1D7 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Slx4Q6P1D7 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slx4Q6P1D7 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC20.12■□□□□ 0.81
Slx4Q6P1D7 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slx4Q6P1D7 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Slx4Q6P1D7 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Slx4Q6P1D7 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slx4Q6P1D7 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slx4Q6P1D7 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Slx4Q6P1D7 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC20.12■□□□□ 0.81
Slx4Q6P1D7 Gm18730-201ENSMUST00000218038 343 ntBASIC20.12■□□□□ 0.81
Slx4Q6P1D7 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC20.12■□□□□ 0.81
Slx4Q6P1D7 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC20.12■□□□□ 0.81
Slx4Q6P1D7 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Slx4Q6P1D7 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slx4Q6P1D7 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slx4Q6P1D7 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slx4Q6P1D7 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slx4Q6P1D7 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC20.11■□□□□ 0.81
Slx4Q6P1D7 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slx4Q6P1D7 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Slx4Q6P1D7 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slx4Q6P1D7 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Slx4Q6P1D7 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Slx4Q6P1D7 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Slx4Q6P1D7 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Slx4Q6P1D7 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC20.11■□□□□ 0.81
Slx4Q6P1D7 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC20.11■□□□□ 0.81
Slx4Q6P1D7 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Slx4Q6P1D7 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC20.11■□□□□ 0.81
Slx4Q6P1D7 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC20.11■□□□□ 0.81
Slx4Q6P1D7 Gm17812-201ENSMUST00000204935 318 ntBASIC20.11■□□□□ 0.81
Slx4Q6P1D7 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
Slx4Q6P1D7 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC20.11■□□□□ 0.81
Slx4Q6P1D7 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Slx4Q6P1D7 Ntng1-201ENSMUST00000051253 327 ntBASIC20.11■□□□□ 0.81
Slx4Q6P1D7 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slx4Q6P1D7 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Slx4Q6P1D7 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slx4Q6P1D7 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slx4Q6P1D7 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slx4Q6P1D7 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slx4Q6P1D7 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slx4Q6P1D7 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slx4Q6P1D7 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Slx4Q6P1D7 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Slx4Q6P1D7 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slx4Q6P1D7 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slx4Q6P1D7 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slx4Q6P1D7 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slx4Q6P1D7 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Slx4Q6P1D7 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms