Protein–RNA interactions for Protein: Q64336

Tbr1, T-box brain protein 1, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tbr1Q64336 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tbr1Q64336 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tbr1Q64336 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tbr1Q64336 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tbr1Q64336 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC11.95□□□□□ -0.5
Tbr1Q64336 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tbr1Q64336 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC11.95□□□□□ -0.5
Tbr1Q64336 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tbr1Q64336 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tbr1Q64336 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tbr1Q64336 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tbr1Q64336 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tbr1Q64336 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Tbr1Q64336 Gm23270-201ENSMUST00000104055 131 ntBASIC11.95□□□□□ -0.5
Tbr1Q64336 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.95□□□□□ -0.5
Tbr1Q64336 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tbr1Q64336 Gm7857-201ENSMUST00000117957 358 ntBASIC11.95□□□□□ -0.5
Tbr1Q64336 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tbr1Q64336 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.95□□□□□ -0.5
Tbr1Q64336 Gm13570-201ENSMUST00000140763 309 ntBASIC11.95□□□□□ -0.5
Tbr1Q64336 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.95□□□□□ -0.5
Tbr1Q64336 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Tbr1Q64336 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tbr1Q64336 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.95□□□□□ -0.5
Tbr1Q64336 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC11.95□□□□□ -0.5
Tbr1Q64336 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tbr1Q64336 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tbr1Q64336 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Tbr1Q64336 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tbr1Q64336 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tbr1Q64336 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tbr1Q64336 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tbr1Q64336 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tbr1Q64336 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tbr1Q64336 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tbr1Q64336 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Tbr1Q64336 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Tbr1Q64336 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Tbr1Q64336 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.94□□□□□ -0.5
Tbr1Q64336 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tbr1Q64336 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Tbr1Q64336 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tbr1Q64336 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tbr1Q64336 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tbr1Q64336 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Tbr1Q64336 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tbr1Q64336 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tbr1Q64336 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Tbr1Q64336 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tbr1Q64336 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC11.94□□□□□ -0.5
Tbr1Q64336 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Tbr1Q64336 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Tbr1Q64336 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tbr1Q64336 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Tbr1Q64336 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tbr1Q64336 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tbr1Q64336 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Tbr1Q64336 Gm5523-201ENSMUST00000180415 997 ntBASIC11.94□□□□□ -0.5
Tbr1Q64336 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.94□□□□□ -0.5
Tbr1Q64336 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Tbr1Q64336 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Tbr1Q64336 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Tbr1Q64336 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.94□□□□□ -0.5
Tbr1Q64336 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tbr1Q64336 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tbr1Q64336 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC11.94□□□□□ -0.5
Tbr1Q64336 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tbr1Q64336 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Tbr1Q64336 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Tbr1Q64336 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tbr1Q64336 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tbr1Q64336 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tbr1Q64336 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tbr1Q64336 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tbr1Q64336 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tbr1Q64336 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC11.94□□□□□ -0.5
Tbr1Q64336 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Tbr1Q64336 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Tbr1Q64336 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Tbr1Q64336 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Tbr1Q64336 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tbr1Q64336 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tbr1Q64336 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tbr1Q64336 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC11.93□□□□□ -0.5
Tbr1Q64336 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tbr1Q64336 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tbr1Q64336 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tbr1Q64336 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tbr1Q64336 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tbr1Q64336 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tbr1Q64336 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Tbr1Q64336 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tbr1Q64336 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC11.93□□□□□ -0.5
Tbr1Q64336 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC11.93□□□□□ -0.5
Tbr1Q64336 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Tbr1Q64336 Gm8959-201ENSMUST00000213150 571 ntBASIC11.93□□□□□ -0.5
Tbr1Q64336 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tbr1Q64336 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tbr1Q64336 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Tbr1Q64336 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms