Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Scn9aQ62205 Gm12266-201ENSMUST00000120311 962 ntBASIC15.37■□□□□ 0.05
Scn9aQ62205 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC15.37■□□□□ 0.05
Scn9aQ62205 Gm10051-201ENSMUST00000145209 414 ntBASIC15.37■□□□□ 0.05
Scn9aQ62205 Gm7207-201ENSMUST00000211575 1067 ntBASIC15.37■□□□□ 0.05
Scn9aQ62205 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC15.37■□□□□ 0.05
Scn9aQ62205 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Scn9aQ62205 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Scn9aQ62205 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Scn9aQ62205 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Scn9aQ62205 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC15.37■□□□□ 0.05
Scn9aQ62205 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Scn9aQ62205 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Scn9aQ62205 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Scn9aQ62205 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Scn9aQ62205 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Scn9aQ62205 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Scn9aQ62205 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Scn9aQ62205 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Scn9aQ62205 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Scn9aQ62205 Gm15131-201ENSMUST00000119124 595 ntBASIC15.36■□□□□ 0.05
Scn9aQ62205 Gm23363-201ENSMUST00000175024 79 ntBASIC15.36■□□□□ 0.05
Scn9aQ62205 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Scn9aQ62205 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Scn9aQ62205 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
Scn9aQ62205 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Scn9aQ62205 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Scn9aQ62205 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Scn9aQ62205 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC15.36■□□□□ 0.05
Scn9aQ62205 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Scn9aQ62205 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Scn9aQ62205 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Scn9aQ62205 Gm4782-201ENSMUST00000168705 2046 ntBASIC15.36■□□□□ 0.05
Scn9aQ62205 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Scn9aQ62205 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Scn9aQ62205 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Scn9aQ62205 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Scn9aQ62205 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC15.36■□□□□ 0.05
Scn9aQ62205 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Scn9aQ62205 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Scn9aQ62205 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Scn9aQ62205 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Scn9aQ62205 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Scn9aQ62205 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC15.36■□□□□ 0.05
Scn9aQ62205 Gm24845-201ENSMUST00000158034 109 ntBASIC15.36■□□□□ 0.05
Scn9aQ62205 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Scn9aQ62205 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Scn9aQ62205 Gm18730-201ENSMUST00000218038 343 ntBASIC15.36■□□□□ 0.05
Scn9aQ62205 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC15.36■□□□□ 0.05
Scn9aQ62205 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Scn9aQ62205 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Scn9aQ62205 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Scn9aQ62205 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Scn9aQ62205 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC15.36■□□□□ 0.05
Scn9aQ62205 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Scn9aQ62205 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Scn9aQ62205 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Scn9aQ62205 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Scn9aQ62205 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Scn9aQ62205 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Scn9aQ62205 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Scn9aQ62205 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC15.35■□□□□ 0.05
Scn9aQ62205 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Scn9aQ62205 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Scn9aQ62205 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Scn9aQ62205 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Scn9aQ62205 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Scn9aQ62205 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Scn9aQ62205 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC15.35■□□□□ 0.05
Scn9aQ62205 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
Scn9aQ62205 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Scn9aQ62205 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Scn9aQ62205 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC15.35■□□□□ 0.05
Scn9aQ62205 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Scn9aQ62205 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Scn9aQ62205 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Scn9aQ62205 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Scn9aQ62205 Gm19353-201ENSMUST00000184561 445 ntBASIC15.35■□□□□ 0.05
Scn9aQ62205 Gm43058-201ENSMUST00000197645 625 ntBASIC15.35■□□□□ 0.05
Scn9aQ62205 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Scn9aQ62205 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Scn9aQ62205 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
Scn9aQ62205 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Scn9aQ62205 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Scn9aQ62205 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC15.35■□□□□ 0.05
Scn9aQ62205 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Scn9aQ62205 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC15.35■□□□□ 0.05
Scn9aQ62205 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Scn9aQ62205 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Scn9aQ62205 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC15.35■□□□□ 0.05
Scn9aQ62205 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Scn9aQ62205 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Scn9aQ62205 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Scn9aQ62205 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Scn9aQ62205 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Scn9aQ62205 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
Scn9aQ62205 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Scn9aQ62205 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC15.35■□□□□ 0.05
Scn9aQ62205 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Scn9aQ62205 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms