Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rai1Q61818 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rai1Q61818 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rai1Q61818 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Rai1Q61818 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rai1Q61818 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rai1Q61818 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rai1Q61818 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rai1Q61818 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.68□□□□□ -0.38
Rai1Q61818 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rai1Q61818 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rai1Q61818 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rai1Q61818 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.68□□□□□ -0.38
Rai1Q61818 Gm25700-201ENSMUST00000177693 110 ntBASIC12.68□□□□□ -0.38
Rai1Q61818 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.68□□□□□ -0.38
Rai1Q61818 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rai1Q61818 Gm13097-201ENSMUST00000210722 397 ntBASIC12.68□□□□□ -0.38
Rai1Q61818 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rai1Q61818 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.68□□□□□ -0.38
Rai1Q61818 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rai1Q61818 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rai1Q61818 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rai1Q61818 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Rai1Q61818 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rai1Q61818 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rai1Q61818 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.68□□□□□ -0.38
Rai1Q61818 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rai1Q61818 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Rai1Q61818 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Rai1Q61818 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Rai1Q61818 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rai1Q61818 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Rai1Q61818 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Rai1Q61818 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Rai1Q61818 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.68□□□□□ -0.38
Rai1Q61818 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rai1Q61818 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rai1Q61818 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rai1Q61818 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rai1Q61818 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rai1Q61818 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rai1Q61818 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC12.68□□□□□ -0.38
Rai1Q61818 Gm3096-201ENSMUST00000185770 364 ntBASIC12.68□□□□□ -0.38
Rai1Q61818 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rai1Q61818 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.68□□□□□ -0.38
Rai1Q61818 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC12.68□□□□□ -0.38
Rai1Q61818 Abhd11os-203ENSMUST00000222613 363 ntBASIC12.68□□□□□ -0.38
Rai1Q61818 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rai1Q61818 Gm9333-201ENSMUST00000205452 1323 ntBASIC12.67□□□□□ -0.38
Rai1Q61818 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rai1Q61818 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rai1Q61818 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC12.67□□□□□ -0.38
Rai1Q61818 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rai1Q61818 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.67□□□□□ -0.38
Rai1Q61818 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Rai1Q61818 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rai1Q61818 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rai1Q61818 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rai1Q61818 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rai1Q61818 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rai1Q61818 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rai1Q61818 Gm23200-201ENSMUST00000104379 132 ntBASIC12.67□□□□□ -0.38
Rai1Q61818 Gm15547-201ENSMUST00000122152 333 ntBASIC12.67□□□□□ -0.38
Rai1Q61818 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Rai1Q61818 B9d1os-201ENSMUST00000137010 674 ntBASIC12.67□□□□□ -0.38
Rai1Q61818 Mir5120-201ENSMUST00000175020 78 ntBASIC12.67□□□□□ -0.38
Rai1Q61818 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rai1Q61818 Mir6979-201ENSMUST00000183927 56 ntBASIC12.67□□□□□ -0.38
Rai1Q61818 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.67□□□□□ -0.38
Rai1Q61818 Gm44967-201ENSMUST00000207047 631 ntBASIC12.67□□□□□ -0.38
Rai1Q61818 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rai1Q61818 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rai1Q61818 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rai1Q61818 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rai1Q61818 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rai1Q61818 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rai1Q61818 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rai1Q61818 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rai1Q61818 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.66□□□□□ -0.38
Rai1Q61818 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.66□□□□□ -0.38
Rai1Q61818 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rai1Q61818 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rai1Q61818 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rai1Q61818 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rai1Q61818 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rai1Q61818 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rai1Q61818 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rai1Q61818 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rai1Q61818 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rai1Q61818 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.66□□□□□ -0.38
Rai1Q61818 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.66□□□□□ -0.38
Rai1Q61818 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.66□□□□□ -0.38
Rai1Q61818 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rai1Q61818 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rai1Q61818 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rai1Q61818 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rai1Q61818 Gm8385-201ENSMUST00000058999 643 ntBASIC12.66□□□□□ -0.38
Rai1Q61818 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rai1Q61818 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rai1Q61818 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms