Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox17Q61473 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sox17Q61473 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.48□□□□□ -0.41
Sox17Q61473 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.48□□□□□ -0.41
Sox17Q61473 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox17Q61473 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Sox17Q61473 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox17Q61473 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
Sox17Q61473 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sox17Q61473 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sox17Q61473 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox17Q61473 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox17Q61473 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sox17Q61473 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sox17Q61473 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox17Q61473 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Sox17Q61473 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox17Q61473 Gm13332-201ENSMUST00000120451 1398 ntBASIC12.48□□□□□ -0.41
Sox17Q61473 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Sox17Q61473 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox17Q61473 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.48□□□□□ -0.41
Sox17Q61473 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sox17Q61473 H2af-ps-201ENSMUST00000119066 295 ntBASIC12.48□□□□□ -0.41
Sox17Q61473 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.48□□□□□ -0.41
Sox17Q61473 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox17Q61473 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sox17Q61473 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC12.48□□□□□ -0.41
Sox17Q61473 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.48□□□□□ -0.41
Sox17Q61473 Gm16476-201ENSMUST00000221544 139 ntBASIC12.48□□□□□ -0.41
Sox17Q61473 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Sox17Q61473 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox17Q61473 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox17Q61473 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox17Q61473 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox17Q61473 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sox17Q61473 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox17Q61473 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox17Q61473 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox17Q61473 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox17Q61473 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox17Q61473 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox17Q61473 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.48□□□□□ -0.41
Sox17Q61473 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sox17Q61473 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.47□□□□□ -0.41
Sox17Q61473 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sox17Q61473 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Sox17Q61473 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox17Q61473 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sox17Q61473 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.47□□□□□ -0.41
Sox17Q61473 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox17Q61473 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox17Q61473 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox17Q61473 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sox17Q61473 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sox17Q61473 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox17Q61473 Paupar-201ENSMUST00000194826 3482 ntBASIC12.47□□□□□ -0.41
Sox17Q61473 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sox17Q61473 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox17Q61473 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.47□□□□□ -0.41
Sox17Q61473 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC12.47□□□□□ -0.41
Sox17Q61473 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sox17Q61473 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.47□□□□□ -0.41
Sox17Q61473 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Sox17Q61473 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Sox17Q61473 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Sox17Q61473 Gm18889-201ENSMUST00000174284 929 ntBASIC12.47□□□□□ -0.41
Sox17Q61473 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sox17Q61473 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sox17Q61473 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sox17Q61473 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.47□□□□□ -0.41
Sox17Q61473 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sox17Q61473 Mzt1-203ENSMUST00000227948 952 ntBASIC12.47□□□□□ -0.41
Sox17Q61473 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.47□□□□□ -0.41
Sox17Q61473 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Sox17Q61473 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox17Q61473 Gm10175-201ENSMUST00000086013 645 ntBASIC12.47□□□□□ -0.41
Sox17Q61473 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox17Q61473 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox17Q61473 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sox17Q61473 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Sox17Q61473 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox17Q61473 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox17Q61473 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sox17Q61473 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox17Q61473 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox17Q61473 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.46□□□□□ -0.41
Sox17Q61473 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox17Q61473 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox17Q61473 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox17Q61473 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sox17Q61473 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox17Q61473 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Sox17Q61473 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox17Q61473 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.46□□□□□ -0.41
Sox17Q61473 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox17Q61473 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sox17Q61473 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Sox17Q61473 Gm13385-201ENSMUST00000121089 220 ntBASIC12.46□□□□□ -0.41
Sox17Q61473 Gm13365-201ENSMUST00000121188 973 ntBASIC12.46□□□□□ -0.41
Sox17Q61473 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms