Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Six4Q61321 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Six4Q61321 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Six4Q61321 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.44□□□□□ -0.26
Six4Q61321 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.44□□□□□ -0.26
Six4Q61321 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.44□□□□□ -0.26
Six4Q61321 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.44□□□□□ -0.26
Six4Q61321 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Six4Q61321 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Six4Q61321 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
Six4Q61321 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Six4Q61321 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Six4Q61321 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Six4Q61321 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Six4Q61321 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Six4Q61321 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.43□□□□□ -0.26
Six4Q61321 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Six4Q61321 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Six4Q61321 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Six4Q61321 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Six4Q61321 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Six4Q61321 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Six4Q61321 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Six4Q61321 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Six4Q61321 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.43□□□□□ -0.26
Six4Q61321 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Six4Q61321 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Six4Q61321 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Six4Q61321 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Six4Q61321 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.43□□□□□ -0.26
Six4Q61321 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.43□□□□□ -0.26
Six4Q61321 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Six4Q61321 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Six4Q61321 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.43□□□□□ -0.26
Six4Q61321 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.43□□□□□ -0.26
Six4Q61321 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.43□□□□□ -0.26
Six4Q61321 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Six4Q61321 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Six4Q61321 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Six4Q61321 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Six4Q61321 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Six4Q61321 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Six4Q61321 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Six4Q61321 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Six4Q61321 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Six4Q61321 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.43□□□□□ -0.26
Six4Q61321 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Six4Q61321 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Six4Q61321 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Six4Q61321 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Six4Q61321 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Six4Q61321 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.42□□□□□ -0.26
Six4Q61321 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Six4Q61321 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Six4Q61321 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Six4Q61321 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.42□□□□□ -0.26
Six4Q61321 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.42□□□□□ -0.26
Six4Q61321 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Six4Q61321 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Six4Q61321 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Six4Q61321 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Six4Q61321 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Six4Q61321 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Six4Q61321 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
Six4Q61321 Gm11478-201ENSMUST00000117851 599 ntBASIC13.42□□□□□ -0.26
Six4Q61321 Gm11803-201ENSMUST00000119966 444 ntBASIC13.42□□□□□ -0.26
Six4Q61321 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Six4Q61321 Gm8652-201ENSMUST00000181363 964 ntBASIC13.42□□□□□ -0.26
Six4Q61321 Gm5745-201ENSMUST00000183748 313 ntBASIC13.42□□□□□ -0.26
Six4Q61321 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Six4Q61321 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.42□□□□□ -0.26
Six4Q61321 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.42□□□□□ -0.26
Six4Q61321 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.42□□□□□ -0.26
Six4Q61321 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Six4Q61321 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Six4Q61321 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Six4Q61321 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Six4Q61321 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Six4Q61321 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Six4Q61321 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Six4Q61321 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.42□□□□□ -0.26
Six4Q61321 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Six4Q61321 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Six4Q61321 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Six4Q61321 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Six4Q61321 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Six4Q61321 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Six4Q61321 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Six4Q61321 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Six4Q61321 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Six4Q61321 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Six4Q61321 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Six4Q61321 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
Six4Q61321 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Six4Q61321 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Six4Q61321 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Six4Q61321 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Six4Q61321 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Six4Q61321 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.41□□□□□ -0.26
Six4Q61321 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms