Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Shroom1Q5SX79 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Shroom1Q5SX79 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shroom1Q5SX79 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shroom1Q5SX79 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.17□□□□□ -0.14
Shroom1Q5SX79 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shroom1Q5SX79 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shroom1Q5SX79 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Shroom1Q5SX79 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shroom1Q5SX79 Gm15198-201ENSMUST00000117283 177 ntBASIC14.17□□□□□ -0.14
Shroom1Q5SX79 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC14.17□□□□□ -0.14
Shroom1Q5SX79 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC14.17□□□□□ -0.14
Shroom1Q5SX79 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shroom1Q5SX79 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shroom1Q5SX79 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Shroom1Q5SX79 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Shroom1Q5SX79 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shroom1Q5SX79 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Shroom1Q5SX79 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shroom1Q5SX79 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shroom1Q5SX79 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Shroom1Q5SX79 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shroom1Q5SX79 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shroom1Q5SX79 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shroom1Q5SX79 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shroom1Q5SX79 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shroom1Q5SX79 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Shroom1Q5SX79 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Shroom1Q5SX79 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.17□□□□□ -0.14
Shroom1Q5SX79 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shroom1Q5SX79 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shroom1Q5SX79 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Shroom1Q5SX79 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shroom1Q5SX79 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shroom1Q5SX79 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.16□□□□□ -0.14
Shroom1Q5SX79 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shroom1Q5SX79 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shroom1Q5SX79 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shroom1Q5SX79 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shroom1Q5SX79 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Shroom1Q5SX79 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Shroom1Q5SX79 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC14.16□□□□□ -0.14
Shroom1Q5SX79 Mir1247-201ENSMUST00000116706 82 ntBASIC14.16□□□□□ -0.14
Shroom1Q5SX79 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC14.16□□□□□ -0.14
Shroom1Q5SX79 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Shroom1Q5SX79 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Shroom1Q5SX79 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC14.16□□□□□ -0.14
Shroom1Q5SX79 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC14.16□□□□□ -0.14
Shroom1Q5SX79 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC14.16□□□□□ -0.14
Shroom1Q5SX79 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Shroom1Q5SX79 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC14.16□□□□□ -0.14
Shroom1Q5SX79 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC14.16□□□□□ -0.14
Shroom1Q5SX79 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shroom1Q5SX79 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shroom1Q5SX79 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shroom1Q5SX79 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Shroom1Q5SX79 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Shroom1Q5SX79 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shroom1Q5SX79 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shroom1Q5SX79 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Shroom1Q5SX79 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Shroom1Q5SX79 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shroom1Q5SX79 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shroom1Q5SX79 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Shroom1Q5SX79 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Shroom1Q5SX79 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Shroom1Q5SX79 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.15□□□□□ -0.14
Shroom1Q5SX79 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shroom1Q5SX79 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Shroom1Q5SX79 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shroom1Q5SX79 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Shroom1Q5SX79 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Shroom1Q5SX79 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Shroom1Q5SX79 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shroom1Q5SX79 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shroom1Q5SX79 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Shroom1Q5SX79 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shroom1Q5SX79 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Shroom1Q5SX79 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shroom1Q5SX79 Gm10339-203ENSMUST00000225409 1671 ntBASIC14.15□□□□□ -0.14
Shroom1Q5SX79 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shroom1Q5SX79 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Shroom1Q5SX79 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Shroom1Q5SX79 Gm12846-201ENSMUST00000120431 1373 ntBASIC14.15□□□□□ -0.14
Shroom1Q5SX79 Gm42853-201ENSMUST00000201273 1387 ntBASIC14.15□□□□□ -0.14
Shroom1Q5SX79 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Shroom1Q5SX79 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Shroom1Q5SX79 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC14.15□□□□□ -0.14
Shroom1Q5SX79 Gm42929-201ENSMUST00000198374 1286 ntBASIC14.15□□□□□ -0.14
Shroom1Q5SX79 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Shroom1Q5SX79 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC14.15□□□□□ -0.14
Shroom1Q5SX79 Gm44974-201ENSMUST00000206387 1279 ntBASIC14.15□□□□□ -0.14
Shroom1Q5SX79 AC159896.2-201ENSMUST00000214753 269 ntBASIC14.15□□□□□ -0.14
Shroom1Q5SX79 AC154319.1-201ENSMUST00000216330 312 ntBASIC14.15□□□□□ -0.14
Shroom1Q5SX79 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Shroom1Q5SX79 AL589735.1-201ENSMUST00000224353 270 ntBASIC14.15□□□□□ -0.14
Shroom1Q5SX79 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.15□□□□□ -0.14
Shroom1Q5SX79 Gm2824-203ENSMUST00000226189 1228 ntBASIC14.15□□□□□ -0.14
Shroom1Q5SX79 CT573086.1-201ENSMUST00000227202 1074 ntBASIC14.15□□□□□ -0.14
Shroom1Q5SX79 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms