Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Trim41Q5NCC3 Gm43416-201ENSMUST00000201916 1015 ntBASIC23.06■■□□□ 1.28
Trim41Q5NCC3 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC23.06■■□□□ 1.28
Trim41Q5NCC3 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Trim41Q5NCC3 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Trim41Q5NCC3 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Trim41Q5NCC3 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Trim41Q5NCC3 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Trim41Q5NCC3 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Trim41Q5NCC3 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC23.05■■□□□ 1.28
Trim41Q5NCC3 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Trim41Q5NCC3 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Trim41Q5NCC3 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Trim41Q5NCC3 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Trim41Q5NCC3 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC23.05■■□□□ 1.28
Trim41Q5NCC3 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Trim41Q5NCC3 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Trim41Q5NCC3 Gm16479-201ENSMUST00000121706 932 ntBASIC23.05■■□□□ 1.28
Trim41Q5NCC3 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC23.05■■□□□ 1.28
Trim41Q5NCC3 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC23.05■■□□□ 1.28
Trim41Q5NCC3 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Trim41Q5NCC3 n-R5s195-201ENSMUST00000082891 119 ntBASIC23.05■■□□□ 1.28
Trim41Q5NCC3 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Trim41Q5NCC3 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC23.05■■□□□ 1.28
Trim41Q5NCC3 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Trim41Q5NCC3 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Trim41Q5NCC3 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Trim41Q5NCC3 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
Trim41Q5NCC3 Gm14608-201ENSMUST00000120030 1553 ntBASIC23.05■■□□□ 1.28
Trim41Q5NCC3 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Trim41Q5NCC3 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Trim41Q5NCC3 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Trim41Q5NCC3 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
Trim41Q5NCC3 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Trim41Q5NCC3 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Trim41Q5NCC3 Gm38049-201ENSMUST00000195698 1372 ntBASIC23.04■■□□□ 1.28
Trim41Q5NCC3 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC23.04■■□□□ 1.28
Trim41Q5NCC3 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
Trim41Q5NCC3 Gm11591-201ENSMUST00000120063 702 ntBASIC23.04■■□□□ 1.28
Trim41Q5NCC3 Gm9083-201ENSMUST00000120423 819 ntBASIC23.04■■□□□ 1.28
Trim41Q5NCC3 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC23.04■■□□□ 1.28
Trim41Q5NCC3 Gm11675-201ENSMUST00000121873 832 ntBASIC23.04■■□□□ 1.28
Trim41Q5NCC3 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Trim41Q5NCC3 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Trim41Q5NCC3 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Trim41Q5NCC3 Gm21769-201ENSMUST00000211922 111 ntBASIC23.04■■□□□ 1.28
Trim41Q5NCC3 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Trim41Q5NCC3 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Trim41Q5NCC3 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Trim41Q5NCC3 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
Trim41Q5NCC3 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Trim41Q5NCC3 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Trim41Q5NCC3 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Trim41Q5NCC3 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Trim41Q5NCC3 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Trim41Q5NCC3 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Trim41Q5NCC3 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Trim41Q5NCC3 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
Trim41Q5NCC3 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Trim41Q5NCC3 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Trim41Q5NCC3 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Trim41Q5NCC3 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Trim41Q5NCC3 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC23.03■■□□□ 1.28
Trim41Q5NCC3 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Trim41Q5NCC3 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Trim41Q5NCC3 Gm18244-201ENSMUST00000219747 1566 ntBASIC23.03■■□□□ 1.28
Trim41Q5NCC3 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Trim41Q5NCC3 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC23.03■■□□□ 1.28
Trim41Q5NCC3 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Trim41Q5NCC3 Gm24830-201ENSMUST00000102024 166 ntBASIC23.03■■□□□ 1.28
Trim41Q5NCC3 Gm4986-201ENSMUST00000119731 549 ntBASIC23.03■■□□□ 1.28
Trim41Q5NCC3 Gm25890-201ENSMUST00000177643 165 ntBASIC23.03■■□□□ 1.28
Trim41Q5NCC3 Rnu1b2-201ENSMUST00000178073 165 ntBASIC23.03■■□□□ 1.28
Trim41Q5NCC3 Rnu1b1-201ENSMUST00000178250 165 ntBASIC23.03■■□□□ 1.28
Trim41Q5NCC3 Gm22614-201ENSMUST00000178300 165 ntBASIC23.03■■□□□ 1.28
Trim41Q5NCC3 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC23.03■■□□□ 1.28
Trim41Q5NCC3 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC23.03■■□□□ 1.28
Trim41Q5NCC3 Gm22042-201ENSMUST00000082989 165 ntBASIC23.03■■□□□ 1.28
Trim41Q5NCC3 Gm26232-201ENSMUST00000083360 166 ntBASIC23.03■■□□□ 1.28
Trim41Q5NCC3 Gm24136-201ENSMUST00000083374 165 ntBASIC23.03■■□□□ 1.28
Trim41Q5NCC3 Rnu1b6-201ENSMUST00000083839 166 ntBASIC23.03■■□□□ 1.28
Trim41Q5NCC3 Gm26110-201ENSMUST00000083971 165 ntBASIC23.03■■□□□ 1.28
Trim41Q5NCC3 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
Trim41Q5NCC3 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC23.03■■□□□ 1.28
Trim41Q5NCC3 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Trim41Q5NCC3 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Trim41Q5NCC3 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Trim41Q5NCC3 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC23.02■■□□□ 1.28
Trim41Q5NCC3 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
Trim41Q5NCC3 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
Trim41Q5NCC3 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC23.02■■□□□ 1.28
Trim41Q5NCC3 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC23.02■■□□□ 1.28
Trim41Q5NCC3 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Trim41Q5NCC3 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
Trim41Q5NCC3 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Trim41Q5NCC3 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC23.02■■□□□ 1.28
Trim41Q5NCC3 Gm25732-201ENSMUST00000175168 60 ntBASIC23.02■■□□□ 1.28
Trim41Q5NCC3 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC23.02■■□□□ 1.28
Trim41Q5NCC3 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Trim41Q5NCC3 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms