Protein–RNA interactions for Protein: Q3UHJ8

Rnf44, RING finger protein 44, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf44Q3UHJ8 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Rnf44Q3UHJ8 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf44Q3UHJ8 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf44Q3UHJ8 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Rnf44Q3UHJ8 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.85□□□□□ -0.35
Rnf44Q3UHJ8 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Rnf44Q3UHJ8 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf44Q3UHJ8 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Rnf44Q3UHJ8 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf44Q3UHJ8 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf44Q3UHJ8 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf44Q3UHJ8 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.85□□□□□ -0.35
Rnf44Q3UHJ8 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf44Q3UHJ8 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.85□□□□□ -0.35
Rnf44Q3UHJ8 Gm11478-201ENSMUST00000117851 599 ntBASIC12.85□□□□□ -0.35
Rnf44Q3UHJ8 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.85□□□□□ -0.35
Rnf44Q3UHJ8 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.85□□□□□ -0.35
Rnf44Q3UHJ8 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf44Q3UHJ8 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf44Q3UHJ8 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
Rnf44Q3UHJ8 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Rnf44Q3UHJ8 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.85□□□□□ -0.35
Rnf44Q3UHJ8 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.85□□□□□ -0.35
Rnf44Q3UHJ8 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.85□□□□□ -0.35
Rnf44Q3UHJ8 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf44Q3UHJ8 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf44Q3UHJ8 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf44Q3UHJ8 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Rnf44Q3UHJ8 Gm5356-201ENSMUST00000093326 615 ntBASIC12.85□□□□□ -0.35
Rnf44Q3UHJ8 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Rnf44Q3UHJ8 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf44Q3UHJ8 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf44Q3UHJ8 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf44Q3UHJ8 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf44Q3UHJ8 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf44Q3UHJ8 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf44Q3UHJ8 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf44Q3UHJ8 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf44Q3UHJ8 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
Rnf44Q3UHJ8 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.85□□□□□ -0.35
Rnf44Q3UHJ8 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Rnf44Q3UHJ8 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf44Q3UHJ8 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf44Q3UHJ8 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf44Q3UHJ8 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf44Q3UHJ8 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf44Q3UHJ8 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Rnf44Q3UHJ8 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.84□□□□□ -0.35
Rnf44Q3UHJ8 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf44Q3UHJ8 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf44Q3UHJ8 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf44Q3UHJ8 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf44Q3UHJ8 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf44Q3UHJ8 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.84□□□□□ -0.35
Rnf44Q3UHJ8 Gm13612-201ENSMUST00000119276 390 ntBASIC12.84□□□□□ -0.35
Rnf44Q3UHJ8 Mir1894-201ENSMUST00000122802 81 ntBASIC12.84□□□□□ -0.35
Rnf44Q3UHJ8 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf44Q3UHJ8 Gm6244-201ENSMUST00000178732 841 ntBASIC12.84□□□□□ -0.35
Rnf44Q3UHJ8 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf44Q3UHJ8 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf44Q3UHJ8 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf44Q3UHJ8 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf44Q3UHJ8 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf44Q3UHJ8 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf44Q3UHJ8 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf44Q3UHJ8 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.84□□□□□ -0.35
Rnf44Q3UHJ8 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.84□□□□□ -0.35
Rnf44Q3UHJ8 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Rnf44Q3UHJ8 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf44Q3UHJ8 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf44Q3UHJ8 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf44Q3UHJ8 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf44Q3UHJ8 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf44Q3UHJ8 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.84□□□□□ -0.35
Rnf44Q3UHJ8 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rnf44Q3UHJ8 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Rnf44Q3UHJ8 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Rnf44Q3UHJ8 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Rnf44Q3UHJ8 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.83□□□□□ -0.35
Rnf44Q3UHJ8 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.83□□□□□ -0.35
Rnf44Q3UHJ8 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Rnf44Q3UHJ8 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.83□□□□□ -0.35
Rnf44Q3UHJ8 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf44Q3UHJ8 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf44Q3UHJ8 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.83□□□□□ -0.36
Rnf44Q3UHJ8 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf44Q3UHJ8 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf44Q3UHJ8 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Rnf44Q3UHJ8 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf44Q3UHJ8 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf44Q3UHJ8 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Rnf44Q3UHJ8 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf44Q3UHJ8 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Rnf44Q3UHJ8 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.83□□□□□ -0.36
Rnf44Q3UHJ8 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf44Q3UHJ8 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf44Q3UHJ8 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf44Q3UHJ8 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Rnf44Q3UHJ8 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rnf44Q3UHJ8 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms