Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Khdc4Q3TCX3 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Khdc4Q3TCX3 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Khdc4Q3TCX3 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Khdc4Q3TCX3 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.69□□□□□ -0.38
Khdc4Q3TCX3 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Khdc4Q3TCX3 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Khdc4Q3TCX3 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Khdc4Q3TCX3 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Khdc4Q3TCX3 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Khdc4Q3TCX3 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Khdc4Q3TCX3 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.69□□□□□ -0.38
Khdc4Q3TCX3 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Khdc4Q3TCX3 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Khdc4Q3TCX3 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Khdc4Q3TCX3 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Khdc4Q3TCX3 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Khdc4Q3TCX3 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Khdc4Q3TCX3 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.69□□□□□ -0.38
Khdc4Q3TCX3 Gm13226-201ENSMUST00000117838 404 ntBASIC12.69□□□□□ -0.38
Khdc4Q3TCX3 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.69□□□□□ -0.38
Khdc4Q3TCX3 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Khdc4Q3TCX3 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.69□□□□□ -0.38
Khdc4Q3TCX3 Gm38671-201ENSMUST00000200573 130 ntBASIC12.69□□□□□ -0.38
Khdc4Q3TCX3 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Khdc4Q3TCX3 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.69□□□□□ -0.38
Khdc4Q3TCX3 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Khdc4Q3TCX3 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Khdc4Q3TCX3 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.69□□□□□ -0.38
Khdc4Q3TCX3 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Khdc4Q3TCX3 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.69□□□□□ -0.38
Khdc4Q3TCX3 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Khdc4Q3TCX3 Gm6091-201ENSMUST00000098307 165 ntBASIC12.69□□□□□ -0.38
Khdc4Q3TCX3 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Khdc4Q3TCX3 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.69□□□□□ -0.38
Khdc4Q3TCX3 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Khdc4Q3TCX3 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Khdc4Q3TCX3 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Khdc4Q3TCX3 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Khdc4Q3TCX3 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
Khdc4Q3TCX3 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Khdc4Q3TCX3 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Khdc4Q3TCX3 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Khdc4Q3TCX3 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Khdc4Q3TCX3 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.69□□□□□ -0.38
Khdc4Q3TCX3 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.69□□□□□ -0.38
Khdc4Q3TCX3 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Khdc4Q3TCX3 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.69□□□□□ -0.38
Khdc4Q3TCX3 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Khdc4Q3TCX3 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Khdc4Q3TCX3 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Khdc4Q3TCX3 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Khdc4Q3TCX3 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.68□□□□□ -0.38
Khdc4Q3TCX3 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Khdc4Q3TCX3 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Khdc4Q3TCX3 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Khdc4Q3TCX3 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.68□□□□□ -0.38
Khdc4Q3TCX3 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Khdc4Q3TCX3 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Khdc4Q3TCX3 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.68□□□□□ -0.38
Khdc4Q3TCX3 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Khdc4Q3TCX3 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.68□□□□□ -0.38
Khdc4Q3TCX3 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Khdc4Q3TCX3 Gm15371-201ENSMUST00000117057 784 ntBASIC12.68□□□□□ -0.38
Khdc4Q3TCX3 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.68□□□□□ -0.38
Khdc4Q3TCX3 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Khdc4Q3TCX3 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Khdc4Q3TCX3 Gm45784-201ENSMUST00000188360 142 ntBASIC12.68□□□□□ -0.38
Khdc4Q3TCX3 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.68□□□□□ -0.38
Khdc4Q3TCX3 Gm7561-201ENSMUST00000211203 886 ntBASIC12.68□□□□□ -0.38
Khdc4Q3TCX3 Gm6983-201ENSMUST00000214912 628 ntBASIC12.68□□□□□ -0.38
Khdc4Q3TCX3 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Khdc4Q3TCX3 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.68□□□□□ -0.38
Khdc4Q3TCX3 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Khdc4Q3TCX3 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.68□□□□□ -0.38
Khdc4Q3TCX3 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Khdc4Q3TCX3 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Khdc4Q3TCX3 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Khdc4Q3TCX3 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Khdc4Q3TCX3 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Khdc4Q3TCX3 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Khdc4Q3TCX3 Matn2-206ENSMUST00000228570 2798 ntBASIC12.68□□□□□ -0.38
Khdc4Q3TCX3 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Khdc4Q3TCX3 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Khdc4Q3TCX3 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.68□□□□□ -0.38
Khdc4Q3TCX3 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Khdc4Q3TCX3 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Khdc4Q3TCX3 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Khdc4Q3TCX3 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Khdc4Q3TCX3 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Khdc4Q3TCX3 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Khdc4Q3TCX3 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Khdc4Q3TCX3 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Khdc4Q3TCX3 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Khdc4Q3TCX3 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Khdc4Q3TCX3 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Khdc4Q3TCX3 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Khdc4Q3TCX3 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Khdc4Q3TCX3 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Khdc4Q3TCX3 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms