Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ush2AQ2QI47 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Gm24279-201ENSMUST00000104236 131 ntBASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Gm15707-201ENSMUST00000118804 996 ntBASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Gm23400-201ENSMUST00000174994 102 ntBASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Gm26463-201ENSMUST00000175065 101 ntBASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Gm24332-201ENSMUST00000175102 102 ntBASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Gm25959-201ENSMUST00000175112 102 ntBASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Gm22475-201ENSMUST00000175169 102 ntBASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Gm22903-201ENSMUST00000175193 102 ntBASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Gm25070-201ENSMUST00000175237 102 ntBASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Gm24159-201ENSMUST00000175264 102 ntBASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Gm25299-201ENSMUST00000175283 102 ntBASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Gm23798-201ENSMUST00000175560 102 ntBASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Gm23802-201ENSMUST00000175565 102 ntBASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Gm25708-201ENSMUST00000177687 102 ntBASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Gm24370-201ENSMUST00000178007 102 ntBASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Gm23049-201ENSMUST00000178068 102 ntBASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Gm28019-201ENSMUST00000178138 101 ntBASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Gm25571-201ENSMUST00000178322 102 ntBASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Gm25355-201ENSMUST00000178456 101 ntBASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Gm24975-201ENSMUST00000178492 101 ntBASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Gm23189-201ENSMUST00000178954 102 ntBASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Gm25100-201ENSMUST00000179750 101 ntBASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Gm23064-201ENSMUST00000179866 101 ntBASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Gm30055-201ENSMUST00000203175 803 ntBASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Gm45060-201ENSMUST00000203293 593 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Gm45085-201ENSMUST00000209100 441 ntBASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ush2AQ2QI47 AC134860.1-201ENSMUST00000224867 660 ntBASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ush2AQ2QI47 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Tnnt3-213ENSMUST00000105952 1040 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Tnnt3-215ENSMUST00000105954 1052 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Tnnt3-216ENSMUST00000105955 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Tnnt3-218ENSMUST00000105958 1050 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Gm15725-201ENSMUST00000119947 1090 ntBASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Spata3-205ENSMUST00000130504 1100 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Cd63-ps-202ENSMUST00000154992 717 ntBASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Tnnt3-225ENSMUST00000179658 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ush2AQ2QI47 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Tmsb15b2-201ENSMUST00000069803 450 ntTSL 2 BASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Tnnt3-202ENSMUST00000078497 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Ush2AQ2QI47 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
Ush2AQ2QI47 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.32
Ush2AQ2QI47 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC6.84□□□□□ -1.32
Ush2AQ2QI47 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.32
Ush2AQ2QI47 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
Ush2AQ2QI47 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
Ush2AQ2QI47 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC6.83□□□□□ -1.32
Ush2AQ2QI47 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC6.83□□□□□ -1.32
Ush2AQ2QI47 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC6.83□□□□□ -1.32
Ush2AQ2QI47 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ush2AQ2QI47 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC6.83□□□□□ -1.32
Ush2AQ2QI47 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC6.83□□□□□ -1.32
Ush2AQ2QI47 Gm37257-201ENSMUST00000194871 717 ntTSL 5 BASIC6.83□□□□□ -1.32
Ush2AQ2QI47 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC6.83□□□□□ -1.32
Ush2AQ2QI47 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ush2AQ2QI47 Rps3a2-201ENSMUST00000074245 792 ntBASIC6.83□□□□□ -1.32
Ush2AQ2QI47 Rps3a3-201ENSMUST00000074680 795 ntBASIC6.83□□□□□ -1.32
Ush2AQ2QI47 Gm17541-201ENSMUST00000080062 525 ntBASIC6.83□□□□□ -1.32
Ush2AQ2QI47 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ush2AQ2QI47 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Ush2AQ2QI47 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Ush2AQ2QI47 Gm43823-201ENSMUST00000197391 1808 ntBASIC6.83□□□□□ -1.32
Ush2AQ2QI47 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ush2AQ2QI47 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ush2AQ2QI47 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ush2AQ2QI47 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Ush2AQ2QI47 Gm7899-201ENSMUST00000192935 1897 ntBASIC6.83□□□□□ -1.32
Ush2AQ2QI47 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Ush2AQ2QI47 Blvra-202ENSMUST00000110389 657 ntTSL 3 BASIC6.83□□□□□ -1.32
Ush2AQ2QI47 Gm14892-201ENSMUST00000117636 267 ntBASIC6.83□□□□□ -1.32
Ush2AQ2QI47 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Ush2AQ2QI47 Gm42430-201ENSMUST00000197209 616 ntBASIC6.83□□□□□ -1.32
Ush2AQ2QI47 Gm5650-201ENSMUST00000209641 598 ntBASIC6.83□□□□□ -1.32
Ush2AQ2QI47 AC124433.1-201ENSMUST00000224483 1063 ntBASIC6.83□□□□□ -1.32
Ush2AQ2QI47 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC6.83□□□□□ -1.32
Ush2AQ2QI47 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Ush2AQ2QI47 Gm38344-201ENSMUST00000195306 1353 ntBASIC6.83□□□□□ -1.32
Ush2AQ2QI47 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms