Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx4Q07424 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx4Q07424 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx4Q07424 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx4Q07424 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx4Q07424 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx4Q07424 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx4Q07424 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx4Q07424 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC10.32□□□□□ -0.76
Cdx4Q07424 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx4Q07424 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx4Q07424 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC10.32□□□□□ -0.76
Cdx4Q07424 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx4Q07424 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Cdx4Q07424 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx4Q07424 Gm11918-201ENSMUST00000121660 179 ntBASIC10.32□□□□□ -0.76
Cdx4Q07424 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC10.32□□□□□ -0.76
Cdx4Q07424 Gm5354-201ENSMUST00000182417 973 ntBASIC10.32□□□□□ -0.76
Cdx4Q07424 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC10.32□□□□□ -0.76
Cdx4Q07424 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC10.32□□□□□ -0.76
Cdx4Q07424 Gm45668-201ENSMUST00000211271 493 ntBASIC10.32□□□□□ -0.76
Cdx4Q07424 Gm18624-201ENSMUST00000220966 658 ntBASIC10.32□□□□□ -0.76
Cdx4Q07424 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC10.32□□□□□ -0.76
Cdx4Q07424 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC10.32□□□□□ -0.76
Cdx4Q07424 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx4Q07424 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Cdx4Q07424 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx4Q07424 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC10.32□□□□□ -0.76
Cdx4Q07424 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx4Q07424 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx4Q07424 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Cdx4Q07424 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx4Q07424 AC154262.2-201ENSMUST00000224310 2293 ntBASIC10.32□□□□□ -0.76
Cdx4Q07424 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx4Q07424 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx4Q07424 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx4Q07424 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Cdx4Q07424 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx4Q07424 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC10.32□□□□□ -0.76
Cdx4Q07424 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx4Q07424 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx4Q07424 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx4Q07424 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC10.32□□□□□ -0.76
Cdx4Q07424 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Cdx4Q07424 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx4Q07424 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx4Q07424 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx4Q07424 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx4Q07424 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
Cdx4Q07424 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx4Q07424 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx4Q07424 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx4Q07424 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx4Q07424 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx4Q07424 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC10.31□□□□□ -0.76
Cdx4Q07424 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx4Q07424 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx4Q07424 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx4Q07424 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx4Q07424 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx4Q07424 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx4Q07424 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx4Q07424 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx4Q07424 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx4Q07424 Gm14127-201ENSMUST00000117906 678 ntBASIC10.31□□□□□ -0.76
Cdx4Q07424 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC10.31□□□□□ -0.76
Cdx4Q07424 Gm27772-201ENSMUST00000184900 187 ntBASIC10.31□□□□□ -0.76
Cdx4Q07424 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC10.31□□□□□ -0.76
Cdx4Q07424 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC10.31□□□□□ -0.76
Cdx4Q07424 Gm18187-201ENSMUST00000196476 984 ntBASIC10.31□□□□□ -0.76
Cdx4Q07424 Gm9908-201ENSMUST00000211534 448 ntBASIC10.31□□□□□ -0.76
Cdx4Q07424 Gm17795-201ENSMUST00000214505 757 ntBASIC10.31□□□□□ -0.76
Cdx4Q07424 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx4Q07424 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx4Q07424 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx4Q07424 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx4Q07424 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC10.31□□□□□ -0.76
Cdx4Q07424 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx4Q07424 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx4Q07424 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx4Q07424 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx4Q07424 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx4Q07424 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC10.31□□□□□ -0.76
Cdx4Q07424 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx4Q07424 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx4Q07424 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx4Q07424 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx4Q07424 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx4Q07424 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx4Q07424 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx4Q07424 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx4Q07424 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx4Q07424 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx4Q07424 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx4Q07424 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx4Q07424 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Cdx4Q07424 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Cdx4Q07424 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cdx4Q07424 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Cdx4Q07424 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms