Protein–RNA interactions for Protein: Q04519

Smpd1, Sphingomyelin phosphodiesterase, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smpd1Q04519 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smpd1Q04519 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.23□□□□□ -0.13
Smpd1Q04519 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smpd1Q04519 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smpd1Q04519 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smpd1Q04519 Gm37234-201ENSMUST00000193259 1441 ntBASIC14.23□□□□□ -0.13
Smpd1Q04519 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smpd1Q04519 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Smpd1Q04519 Gm43423-201ENSMUST00000198390 2094 ntBASIC14.22□□□□□ -0.13
Smpd1Q04519 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smpd1Q04519 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC14.22□□□□□ -0.13
Smpd1Q04519 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smpd1Q04519 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smpd1Q04519 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smpd1Q04519 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smpd1Q04519 Gm43273-201ENSMUST00000199649 2594 ntBASIC14.22□□□□□ -0.13
Smpd1Q04519 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
Smpd1Q04519 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smpd1Q04519 V1rg10-201ENSMUST00000183378 937 ntBASIC14.22□□□□□ -0.13
Smpd1Q04519 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smpd1Q04519 Gm28180-201ENSMUST00000189608 722 ntBASIC14.22□□□□□ -0.13
Smpd1Q04519 Gm43133-201ENSMUST00000197472 463 ntBASIC14.22□□□□□ -0.13
Smpd1Q04519 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC14.22□□□□□ -0.13
Smpd1Q04519 Gm7172-201ENSMUST00000218047 1152 ntBASIC14.22□□□□□ -0.13
Smpd1Q04519 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC14.22□□□□□ -0.13
Smpd1Q04519 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smpd1Q04519 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smpd1Q04519 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smpd1Q04519 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Smpd1Q04519 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smpd1Q04519 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smpd1Q04519 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smpd1Q04519 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.22□□□□□ -0.13
Smpd1Q04519 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smpd1Q04519 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smpd1Q04519 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smpd1Q04519 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smpd1Q04519 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smpd1Q04519 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smpd1Q04519 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Smpd1Q04519 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Smpd1Q04519 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smpd1Q04519 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Smpd1Q04519 CT030185.2-201ENSMUST00000222614 1310 ntBASIC14.21□□□□□ -0.13
Smpd1Q04519 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smpd1Q04519 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Smpd1Q04519 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smpd1Q04519 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smpd1Q04519 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Smpd1Q04519 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smpd1Q04519 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smpd1Q04519 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.21□□□□□ -0.13
Smpd1Q04519 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Smpd1Q04519 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC14.21□□□□□ -0.13
Smpd1Q04519 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC14.21□□□□□ -0.13
Smpd1Q04519 Cep97-204ENSMUST00000121129 989 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Smpd1Q04519 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Smpd1Q04519 Gm8801-201ENSMUST00000173255 1064 ntBASIC14.21□□□□□ -0.13
Smpd1Q04519 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Smpd1Q04519 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC14.21□□□□□ -0.13
Smpd1Q04519 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC14.21□□□□□ -0.13
Smpd1Q04519 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC14.21□□□□□ -0.13
Smpd1Q04519 Gm44683-201ENSMUST00000209088 484 ntBASIC14.21□□□□□ -0.13
Smpd1Q04519 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Smpd1Q04519 AC124569.4-201ENSMUST00000223830 1220 ntBASIC14.21□□□□□ -0.13
Smpd1Q04519 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Smpd1Q04519 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smpd1Q04519 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smpd1Q04519 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Smpd1Q04519 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smpd1Q04519 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Smpd1Q04519 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smpd1Q04519 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.21□□□□□ -0.14
Smpd1Q04519 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smpd1Q04519 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smpd1Q04519 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Smpd1Q04519 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smpd1Q04519 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smpd1Q04519 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smpd1Q04519 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Smpd1Q04519 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smpd1Q04519 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smpd1Q04519 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smpd1Q04519 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smpd1Q04519 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.2□□□□□ -0.14
Smpd1Q04519 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smpd1Q04519 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smpd1Q04519 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smpd1Q04519 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Smpd1Q04519 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Smpd1Q04519 Olfr183-204ENSMUST00000214831 1906 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Smpd1Q04519 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smpd1Q04519 Gm16202-201ENSMUST00000117532 544 ntBASIC14.2□□□□□ -0.14
Smpd1Q04519 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smpd1Q04519 Gm12329-201ENSMUST00000120829 1007 ntBASIC14.2□□□□□ -0.14
Smpd1Q04519 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC14.2□□□□□ -0.14
Smpd1Q04519 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smpd1Q04519 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC14.2□□□□□ -0.14
Smpd1Q04519 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC14.2□□□□□ -0.14
Smpd1Q04519 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms