Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gabpb1Q00420 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gabpb1Q00420 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gabpb1Q00420 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gabpb1Q00420 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Gabpb1Q00420 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Gabpb1Q00420 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.54□□□□□ -0.24
Gabpb1Q00420 Gm15371-201ENSMUST00000117057 784 ntBASIC13.54□□□□□ -0.24
Gabpb1Q00420 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.54□□□□□ -0.24
Gabpb1Q00420 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.54□□□□□ -0.24
Gabpb1Q00420 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.54□□□□□ -0.24
Gabpb1Q00420 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gabpb1Q00420 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.54□□□□□ -0.24
Gabpb1Q00420 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gabpb1Q00420 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.54□□□□□ -0.24
Gabpb1Q00420 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.54□□□□□ -0.24
Gabpb1Q00420 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Gabpb1Q00420 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gabpb1Q00420 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gabpb1Q00420 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gabpb1Q00420 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gabpb1Q00420 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Gabpb1Q00420 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.54□□□□□ -0.24
Gabpb1Q00420 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.54□□□□□ -0.24
Gabpb1Q00420 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Gabpb1Q00420 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.54□□□□□ -0.24
Gabpb1Q00420 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Gabpb1Q00420 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Gabpb1Q00420 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gabpb1Q00420 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gabpb1Q00420 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gabpb1Q00420 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gabpb1Q00420 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gabpb1Q00420 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Gabpb1Q00420 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gabpb1Q00420 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gabpb1Q00420 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Gabpb1Q00420 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gabpb1Q00420 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.53□□□□□ -0.24
Gabpb1Q00420 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.53□□□□□ -0.24
Gabpb1Q00420 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.53□□□□□ -0.24
Gabpb1Q00420 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Gabpb1Q00420 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Gabpb1Q00420 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.53□□□□□ -0.24
Gabpb1Q00420 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.53□□□□□ -0.24
Gabpb1Q00420 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Gabpb1Q00420 Gm5866-201ENSMUST00000177881 973 ntBASIC13.53□□□□□ -0.24
Gabpb1Q00420 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Gabpb1Q00420 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Gabpb1Q00420 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.53□□□□□ -0.24
Gabpb1Q00420 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Gabpb1Q00420 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gabpb1Q00420 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.53□□□□□ -0.24
Gabpb1Q00420 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gabpb1Q00420 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Gabpb1Q00420 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gabpb1Q00420 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gabpb1Q00420 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Gabpb1Q00420 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.53□□□□□ -0.24
Gabpb1Q00420 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Gabpb1Q00420 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gabpb1Q00420 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Gabpb1Q00420 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gabpb1Q00420 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gabpb1Q00420 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gabpb1Q00420 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gabpb1Q00420 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Gabpb1Q00420 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Gabpb1Q00420 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Gabpb1Q00420 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Gabpb1Q00420 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.53□□□□□ -0.24
Gabpb1Q00420 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Gabpb1Q00420 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.52□□□□□ -0.24
Gabpb1Q00420 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Gabpb1Q00420 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Gabpb1Q00420 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Gabpb1Q00420 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Gabpb1Q00420 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Gabpb1Q00420 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gabpb1Q00420 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Gabpb1Q00420 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gabpb1Q00420 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gabpb1Q00420 Gm12341-201ENSMUST00000119724 503 ntBASIC13.52□□□□□ -0.25
Gabpb1Q00420 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.52□□□□□ -0.25
Gabpb1Q00420 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.52□□□□□ -0.25
Gabpb1Q00420 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Gabpb1Q00420 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.52□□□□□ -0.25
Gabpb1Q00420 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.52□□□□□ -0.25
Gabpb1Q00420 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gabpb1Q00420 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.52□□□□□ -0.25
Gabpb1Q00420 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.52□□□□□ -0.25
Gabpb1Q00420 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.52□□□□□ -0.25
Gabpb1Q00420 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.52□□□□□ -0.25
Gabpb1Q00420 Gm18307-201ENSMUST00000206864 949 ntBASIC13.52□□□□□ -0.25
Gabpb1Q00420 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC13.52□□□□□ -0.25
Gabpb1Q00420 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gabpb1Q00420 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.52□□□□□ -0.25
Gabpb1Q00420 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.52□□□□□ -0.25
Gabpb1Q00420 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Gabpb1Q00420 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms