Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ldb1P70662 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ldb1P70662 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ldb1P70662 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ldb1P70662 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ldb1P70662 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ldb1P70662 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ldb1P70662 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ldb1P70662 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ldb1P70662 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ldb1P70662 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ldb1P70662 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ldb1P70662 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ldb1P70662 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.28□□□□□ -0.28
Ldb1P70662 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ldb1P70662 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.28□□□□□ -0.28
Ldb1P70662 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ldb1P70662 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ldb1P70662 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ldb1P70662 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ldb1P70662 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ldb1P70662 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ldb1P70662 Gm7488-201ENSMUST00000117148 684 ntBASIC13.28□□□□□ -0.28
Ldb1P70662 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.28□□□□□ -0.28
Ldb1P70662 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.28□□□□□ -0.28
Ldb1P70662 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ldb1P70662 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.28□□□□□ -0.28
Ldb1P70662 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.28□□□□□ -0.28
Ldb1P70662 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.28□□□□□ -0.28
Ldb1P70662 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Ldb1P70662 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.28□□□□□ -0.28
Ldb1P70662 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ldb1P70662 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ldb1P70662 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ldb1P70662 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ldb1P70662 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ldb1P70662 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ldb1P70662 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ldb1P70662 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ldb1P70662 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ldb1P70662 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.28□□□□□ -0.28
Ldb1P70662 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ldb1P70662 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ldb1P70662 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Ldb1P70662 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.28□□□□□ -0.28
Ldb1P70662 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ldb1P70662 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Ldb1P70662 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ldb1P70662 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ldb1P70662 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ldb1P70662 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ldb1P70662 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.27□□□□□ -0.28
Ldb1P70662 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.27□□□□□ -0.28
Ldb1P70662 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ldb1P70662 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Ldb1P70662 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ldb1P70662 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ldb1P70662 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ldb1P70662 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ldb1P70662 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Ldb1P70662 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.27□□□□□ -0.29
Ldb1P70662 Gm5866-201ENSMUST00000177881 973 ntBASIC13.27□□□□□ -0.29
Ldb1P70662 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.27□□□□□ -0.29
Ldb1P70662 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.27□□□□□ -0.29
Ldb1P70662 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.27□□□□□ -0.29
Ldb1P70662 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ldb1P70662 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Ldb1P70662 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ldb1P70662 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ldb1P70662 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
Ldb1P70662 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ldb1P70662 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ldb1P70662 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ldb1P70662 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ldb1P70662 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ldb1P70662 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
Ldb1P70662 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ldb1P70662 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ldb1P70662 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ldb1P70662 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ldb1P70662 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ldb1P70662 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ldb1P70662 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ldb1P70662 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Ldb1P70662 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ldb1P70662 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ldb1P70662 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ldb1P70662 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.26□□□□□ -0.29
Ldb1P70662 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ldb1P70662 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Ldb1P70662 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.26□□□□□ -0.29
Ldb1P70662 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Ldb1P70662 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ldb1P70662 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ldb1P70662 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ldb1P70662 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ldb1P70662 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ldb1P70662 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ldb1P70662 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ldb1P70662 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms