Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shox2P70390 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shox2P70390 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shox2P70390 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shox2P70390 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shox2P70390 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.15□□□□□ -0.3
Shox2P70390 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Shox2P70390 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Shox2P70390 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shox2P70390 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shox2P70390 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.15□□□□□ -0.3
Shox2P70390 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shox2P70390 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Shox2P70390 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shox2P70390 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Shox2P70390 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Shox2P70390 Gm19931-201ENSMUST00000198920 368 ntBASIC13.15□□□□□ -0.3
Shox2P70390 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC13.15□□□□□ -0.3
Shox2P70390 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.15□□□□□ -0.3
Shox2P70390 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shox2P70390 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.15□□□□□ -0.3
Shox2P70390 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shox2P70390 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shox2P70390 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Shox2P70390 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Shox2P70390 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shox2P70390 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Shox2P70390 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Shox2P70390 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shox2P70390 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.15□□□□□ -0.3
Shox2P70390 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.15□□□□□ -0.3
Shox2P70390 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Shox2P70390 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Shox2P70390 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
Shox2P70390 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.31
Shox2P70390 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Shox2P70390 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shox2P70390 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Shox2P70390 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
Shox2P70390 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.14□□□□□ -0.31
Shox2P70390 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Shox2P70390 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shox2P70390 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Shox2P70390 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Shox2P70390 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Shox2P70390 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Shox2P70390 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.14□□□□□ -0.31
Shox2P70390 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.14□□□□□ -0.31
Shox2P70390 Gm2810-201ENSMUST00000118681 990 ntBASIC13.14□□□□□ -0.31
Shox2P70390 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shox2P70390 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC13.14□□□□□ -0.31
Shox2P70390 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Shox2P70390 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.14□□□□□ -0.31
Shox2P70390 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shox2P70390 Gm15590-201ENSMUST00000078419 552 ntBASIC13.14□□□□□ -0.31
Shox2P70390 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shox2P70390 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Shox2P70390 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.14□□□□□ -0.31
Shox2P70390 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shox2P70390 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Shox2P70390 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shox2P70390 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.14□□□□□ -0.31
Shox2P70390 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Shox2P70390 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Shox2P70390 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Shox2P70390 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shox2P70390 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Shox2P70390 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Shox2P70390 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shox2P70390 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shox2P70390 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shox2P70390 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Shox2P70390 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.14□□□□□ -0.31
Shox2P70390 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shox2P70390 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shox2P70390 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shox2P70390 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Shox2P70390 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Shox2P70390 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shox2P70390 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shox2P70390 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shox2P70390 Gm37014-201ENSMUST00000194723 2253 ntBASIC13.13□□□□□ -0.31
Shox2P70390 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Shox2P70390 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
Shox2P70390 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shox2P70390 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shox2P70390 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.13□□□□□ -0.31
Shox2P70390 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Shox2P70390 Gm15770-201ENSMUST00000117498 584 ntBASIC13.13□□□□□ -0.31
Shox2P70390 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.13□□□□□ -0.31
Shox2P70390 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC13.13□□□□□ -0.31
Shox2P70390 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Shox2P70390 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.13□□□□□ -0.31
Shox2P70390 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.13□□□□□ -0.31
Shox2P70390 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shox2P70390 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shox2P70390 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Shox2P70390 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Shox2P70390 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Shox2P70390 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms