Protein–RNA interactions for Protein: P62962

Pfn1, Profilin-1, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfn1P62962 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Pfn1P62962 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pfn1P62962 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pfn1P62962 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Pfn1P62962 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pfn1P62962 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Pfn1P62962 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pfn1P62962 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pfn1P62962 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC10.32□□□□□ -0.76
Pfn1P62962 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pfn1P62962 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pfn1P62962 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pfn1P62962 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pfn1P62962 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pfn1P62962 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pfn1P62962 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
Pfn1P62962 AC139350.1-201ENSMUST00000227064 1594 ntBASIC10.32□□□□□ -0.76
Pfn1P62962 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pfn1P62962 Tmed9-203ENSMUST00000224741 1450 ntBASIC10.32□□□□□ -0.76
Pfn1P62962 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pfn1P62962 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pfn1P62962 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pfn1P62962 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pfn1P62962 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pfn1P62962 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pfn1P62962 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Pfn1P62962 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pfn1P62962 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC10.32□□□□□ -0.76
Pfn1P62962 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC10.32□□□□□ -0.76
Pfn1P62962 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Pfn1P62962 Ighv8-14-201ENSMUST00000196781 358 ntBASIC10.32□□□□□ -0.76
Pfn1P62962 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Pfn1P62962 AC132467.2-202ENSMUST00000227726 559 ntBASIC10.32□□□□□ -0.76
Pfn1P62962 AC121598.1-201ENSMUST00000228224 1019 ntBASIC10.32□□□□□ -0.76
Pfn1P62962 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pfn1P62962 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pfn1P62962 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC10.32□□□□□ -0.76
Pfn1P62962 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pfn1P62962 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pfn1P62962 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Pfn1P62962 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pfn1P62962 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pfn1P62962 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC10.32□□□□□ -0.76
Pfn1P62962 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pfn1P62962 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC10.32□□□□□ -0.76
Pfn1P62962 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Pfn1P62962 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pfn1P62962 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pfn1P62962 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pfn1P62962 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
Pfn1P62962 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Pfn1P62962 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC10.32□□□□□ -0.76
Pfn1P62962 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pfn1P62962 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Pfn1P62962 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC10.31□□□□□ -0.76
Pfn1P62962 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pfn1P62962 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Pfn1P62962 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pfn1P62962 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC10.31□□□□□ -0.76
Pfn1P62962 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pfn1P62962 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pfn1P62962 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pfn1P62962 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pfn1P62962 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Pfn1P62962 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pfn1P62962 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pfn1P62962 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Pfn1P62962 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Pfn1P62962 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pfn1P62962 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Pfn1P62962 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC10.31□□□□□ -0.76
Pfn1P62962 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Pfn1P62962 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
Pfn1P62962 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pfn1P62962 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pfn1P62962 Gm15427-201ENSMUST00000117288 531 ntBASIC10.31□□□□□ -0.76
Pfn1P62962 Gm15678-201ENSMUST00000117573 960 ntBASIC10.31□□□□□ -0.76
Pfn1P62962 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC10.31□□□□□ -0.76
Pfn1P62962 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pfn1P62962 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC10.31□□□□□ -0.76
Pfn1P62962 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC10.31□□□□□ -0.76
Pfn1P62962 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC10.31□□□□□ -0.76
Pfn1P62962 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC10.31□□□□□ -0.76
Pfn1P62962 AC139350.3-201ENSMUST00000226151 420 ntBASIC10.31□□□□□ -0.76
Pfn1P62962 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pfn1P62962 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pfn1P62962 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Pfn1P62962 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pfn1P62962 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pfn1P62962 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pfn1P62962 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pfn1P62962 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC10.31□□□□□ -0.76
Pfn1P62962 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC10.31□□□□□ -0.76
Pfn1P62962 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Pfn1P62962 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Pfn1P62962 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pfn1P62962 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Pfn1P62962 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC10.31□□□□□ -0.76
Pfn1P62962 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Pfn1P62962 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms