Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ybx1P62960 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ybx1P62960 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ybx1P62960 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ybx1P62960 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.64□□□□□ -0.23
Ybx1P62960 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ybx1P62960 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ybx1P62960 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.63□□□□□ -0.23
Ybx1P62960 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ybx1P62960 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.63□□□□□ -0.23
Ybx1P62960 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ybx1P62960 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ybx1P62960 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ybx1P62960 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Ybx1P62960 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ybx1P62960 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Ybx1P62960 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.63□□□□□ -0.23
Ybx1P62960 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Ybx1P62960 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ybx1P62960 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ybx1P62960 Gm15370-201ENSMUST00000117158 253 ntBASIC13.63□□□□□ -0.23
Ybx1P62960 Gm16202-201ENSMUST00000117532 544 ntBASIC13.63□□□□□ -0.23
Ybx1P62960 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ybx1P62960 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC13.63□□□□□ -0.23
Ybx1P62960 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC13.63□□□□□ -0.23
Ybx1P62960 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC13.63□□□□□ -0.23
Ybx1P62960 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC13.63□□□□□ -0.23
Ybx1P62960 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ybx1P62960 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC13.63□□□□□ -0.23
Ybx1P62960 n-R5s195-201ENSMUST00000082891 119 ntBASIC13.63□□□□□ -0.23
Ybx1P62960 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ybx1P62960 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ybx1P62960 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ybx1P62960 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ybx1P62960 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ybx1P62960 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ybx1P62960 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ybx1P62960 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ybx1P62960 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ybx1P62960 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ybx1P62960 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ybx1P62960 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ybx1P62960 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Ybx1P62960 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ybx1P62960 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ybx1P62960 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.63□□□□□ -0.23
Ybx1P62960 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ybx1P62960 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ybx1P62960 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ybx1P62960 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ybx1P62960 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Ybx1P62960 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ybx1P62960 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ybx1P62960 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ybx1P62960 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ybx1P62960 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.62□□□□□ -0.23
Ybx1P62960 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Ybx1P62960 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ybx1P62960 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.62□□□□□ -0.23
Ybx1P62960 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ybx1P62960 Gm3756-201ENSMUST00000169182 1355 ntBASIC13.62□□□□□ -0.23
Ybx1P62960 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ybx1P62960 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ybx1P62960 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ybx1P62960 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Ybx1P62960 Gm16479-201ENSMUST00000121706 932 ntBASIC13.62□□□□□ -0.23
Ybx1P62960 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC13.62□□□□□ -0.23
Ybx1P62960 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ybx1P62960 Gm7809-201ENSMUST00000153199 742 ntBASIC13.62□□□□□ -0.23
Ybx1P62960 Gm26083-201ENSMUST00000157904 193 ntBASIC13.62□□□□□ -0.23
Ybx1P62960 Gm16379-201ENSMUST00000161469 348 ntBASIC13.62□□□□□ -0.23
Ybx1P62960 Gm2991-201ENSMUST00000173338 480 ntBASIC13.62□□□□□ -0.23
Ybx1P62960 Mir3102-201ENSMUST00000175555 104 ntBASIC13.62□□□□□ -0.23
Ybx1P62960 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ybx1P62960 Gm8762-201ENSMUST00000193486 339 ntBASIC13.62□□□□□ -0.23
Ybx1P62960 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ybx1P62960 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.62□□□□□ -0.23
Ybx1P62960 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ybx1P62960 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ybx1P62960 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ybx1P62960 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ybx1P62960 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.62□□□□□ -0.23
Ybx1P62960 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ybx1P62960 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.62□□□□□ -0.23
Ybx1P62960 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ybx1P62960 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ybx1P62960 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.62□□□□□ -0.23
Ybx1P62960 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Ybx1P62960 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Ybx1P62960 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ybx1P62960 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ybx1P62960 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Ybx1P62960 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ybx1P62960 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Ybx1P62960 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.62□□□□□ -0.23
Ybx1P62960 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Ybx1P62960 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ybx1P62960 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Ybx1P62960 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Ybx1P62960 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms