Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pdx1P52946 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pdx1P52946 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pdx1P52946 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pdx1P52946 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pdx1P52946 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pdx1P52946 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pdx1P52946 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pdx1P52946 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pdx1P52946 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pdx1P52946 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pdx1P52946 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pdx1P52946 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pdx1P52946 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pdx1P52946 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.18□□□□□ -0.3
Pdx1P52946 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Pdx1P52946 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pdx1P52946 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pdx1P52946 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.18□□□□□ -0.3
Pdx1P52946 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pdx1P52946 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.18□□□□□ -0.3
Pdx1P52946 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pdx1P52946 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pdx1P52946 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Pdx1P52946 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Pdx1P52946 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pdx1P52946 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.18□□□□□ -0.3
Pdx1P52946 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pdx1P52946 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pdx1P52946 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pdx1P52946 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pdx1P52946 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pdx1P52946 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Pdx1P52946 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.18□□□□□ -0.3
Pdx1P52946 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.18□□□□□ -0.3
Pdx1P52946 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pdx1P52946 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pdx1P52946 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pdx1P52946 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pdx1P52946 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Pdx1P52946 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pdx1P52946 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Pdx1P52946 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pdx1P52946 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pdx1P52946 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pdx1P52946 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Pdx1P52946 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pdx1P52946 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Pdx1P52946 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.17□□□□□ -0.3
Pdx1P52946 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pdx1P52946 Gm6447-201ENSMUST00000118905 835 ntBASIC13.17□□□□□ -0.3
Pdx1P52946 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.17□□□□□ -0.3
Pdx1P52946 Gm7653-201ENSMUST00000214567 508 ntBASIC13.17□□□□□ -0.3
Pdx1P52946 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.17□□□□□ -0.3
Pdx1P52946 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pdx1P52946 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Pdx1P52946 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pdx1P52946 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pdx1P52946 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Pdx1P52946 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pdx1P52946 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pdx1P52946 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pdx1P52946 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pdx1P52946 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pdx1P52946 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pdx1P52946 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pdx1P52946 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pdx1P52946 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Pdx1P52946 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pdx1P52946 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pdx1P52946 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.16□□□□□ -0.3
Pdx1P52946 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pdx1P52946 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pdx1P52946 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pdx1P52946 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pdx1P52946 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pdx1P52946 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pdx1P52946 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pdx1P52946 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.16□□□□□ -0.3
Pdx1P52946 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.16□□□□□ -0.3
Pdx1P52946 Gm45841-201ENSMUST00000207700 164 ntBASIC13.16□□□□□ -0.3
Pdx1P52946 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.16□□□□□ -0.3
Pdx1P52946 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.16□□□□□ -0.3
Pdx1P52946 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.16□□□□□ -0.3
Pdx1P52946 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pdx1P52946 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pdx1P52946 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.16□□□□□ -0.3
Pdx1P52946 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Pdx1P52946 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pdx1P52946 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pdx1P52946 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pdx1P52946 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pdx1P52946 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pdx1P52946 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.16□□□□□ -0.3
Pdx1P52946 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.16□□□□□ -0.3
Pdx1P52946 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pdx1P52946 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Pdx1P52946 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pdx1P52946 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pdx1P52946 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms