Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shmt1P50431 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Shmt1P50431 Gm8213-201ENSMUST00000118191 441 ntBASIC14.09□□□□□ -0.15
Shmt1P50431 Gm12203-201ENSMUST00000118235 598 ntBASIC14.09□□□□□ -0.15
Shmt1P50431 Gm12209-201ENSMUST00000120089 596 ntBASIC14.09□□□□□ -0.15
Shmt1P50431 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC14.09□□□□□ -0.15
Shmt1P50431 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shmt1P50431 Gm24644-201ENSMUST00000157114 139 ntBASIC14.09□□□□□ -0.15
Shmt1P50431 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Shmt1P50431 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Shmt1P50431 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC14.09□□□□□ -0.15
Shmt1P50431 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC14.09□□□□□ -0.15
Shmt1P50431 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC14.09□□□□□ -0.15
Shmt1P50431 CT573086.1-201ENSMUST00000227202 1074 ntBASIC14.09□□□□□ -0.15
Shmt1P50431 AC134335.2-201ENSMUST00000227660 440 ntBASIC14.09□□□□□ -0.15
Shmt1P50431 AC122459.1-201ENSMUST00000228373 885 ntBASIC14.09□□□□□ -0.15
Shmt1P50431 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shmt1P50431 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shmt1P50431 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shmt1P50431 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shmt1P50431 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shmt1P50431 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.09□□□□□ -0.15
Shmt1P50431 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.09□□□□□ -0.15
Shmt1P50431 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shmt1P50431 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Shmt1P50431 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Shmt1P50431 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC14.09□□□□□ -0.15
Shmt1P50431 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Shmt1P50431 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shmt1P50431 Grk6-205ENSMUST00000224653 2976 ntBASIC14.09□□□□□ -0.15
Shmt1P50431 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shmt1P50431 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shmt1P50431 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shmt1P50431 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Shmt1P50431 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC14.09□□□□□ -0.15
Shmt1P50431 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Shmt1P50431 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Shmt1P50431 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.09□□□□□ -0.15
Shmt1P50431 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Shmt1P50431 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shmt1P50431 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Shmt1P50431 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.08□□□□□ -0.16
Shmt1P50431 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shmt1P50431 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shmt1P50431 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Shmt1P50431 Mir1938-201ENSMUST00000158746 100 ntBASIC14.08□□□□□ -0.16
Shmt1P50431 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shmt1P50431 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Shmt1P50431 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shmt1P50431 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shmt1P50431 Gm27331-201ENSMUST00000183705 60 ntBASIC14.08□□□□□ -0.16
Shmt1P50431 Gm29649-201ENSMUST00000185649 419 ntBASIC14.08□□□□□ -0.16
Shmt1P50431 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC14.08□□□□□ -0.16
Shmt1P50431 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC14.08□□□□□ -0.16
Shmt1P50431 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC14.08□□□□□ -0.16
Shmt1P50431 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shmt1P50431 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shmt1P50431 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shmt1P50431 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shmt1P50431 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Shmt1P50431 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Shmt1P50431 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Shmt1P50431 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Shmt1P50431 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Shmt1P50431 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shmt1P50431 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.07□□□□□ -0.16
Shmt1P50431 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shmt1P50431 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shmt1P50431 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shmt1P50431 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shmt1P50431 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shmt1P50431 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shmt1P50431 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shmt1P50431 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shmt1P50431 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shmt1P50431 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC14.07□□□□□ -0.16
Shmt1P50431 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC14.07□□□□□ -0.16
Shmt1P50431 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Shmt1P50431 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC14.07□□□□□ -0.16
Shmt1P50431 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Shmt1P50431 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shmt1P50431 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Shmt1P50431 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shmt1P50431 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shmt1P50431 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shmt1P50431 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shmt1P50431 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shmt1P50431 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shmt1P50431 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Shmt1P50431 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shmt1P50431 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shmt1P50431 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Shmt1P50431 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shmt1P50431 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Shmt1P50431 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shmt1P50431 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shmt1P50431 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shmt1P50431 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shmt1P50431 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Shmt1P50431 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms