Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Gm5566-201ENSMUST00000116118 459 ntBASIC12.8□□□□□ -0.36
Prox1P48437 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC12.8□□□□□ -0.36
Prox1P48437 Gm13365-201ENSMUST00000121188 973 ntBASIC12.8□□□□□ -0.36
Prox1P48437 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.8□□□□□ -0.36
Prox1P48437 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC12.8□□□□□ -0.36
Prox1P48437 Gm7063-201ENSMUST00000186840 981 ntBASIC12.8□□□□□ -0.36
Prox1P48437 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Prox1P48437 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Prox1P48437 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Prox1P48437 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Prox1P48437 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC12.8□□□□□ -0.36
Prox1P48437 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC12.8□□□□□ -0.36
Prox1P48437 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prox1P48437 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Prox1P48437 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Prox1P48437 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prox1P48437 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prox1P48437 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prox1P48437 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prox1P48437 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prox1P48437 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Prox1P48437 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.8□□□□□ -0.36
Prox1P48437 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.8□□□□□ -0.36
Prox1P48437 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Prox1P48437 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prox1P48437 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prox1P48437 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Prox1P48437 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prox1P48437 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prox1P48437 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.8□□□□□ -0.36
Prox1P48437 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.8□□□□□ -0.36
Prox1P48437 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prox1P48437 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prox1P48437 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prox1P48437 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prox1P48437 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Prox1P48437 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Prox1P48437 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prox1P48437 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Prox1P48437 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Prox1P48437 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prox1P48437 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prox1P48437 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Prox1P48437 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Prox1P48437 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Prox1P48437 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.79□□□□□ -0.36
Prox1P48437 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prox1P48437 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Prox1P48437 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12.79□□□□□ -0.36
Prox1P48437 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prox1P48437 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Prox1P48437 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prox1P48437 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Prox1P48437 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prox1P48437 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.79□□□□□ -0.36
Prox1P48437 AC090659.2-201ENSMUST00000225378 1186 ntBASIC12.79□□□□□ -0.36
Prox1P48437 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Prox1P48437 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prox1P48437 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Prox1P48437 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Prox1P48437 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prox1P48437 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Prox1P48437 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.79□□□□□ -0.36
Prox1P48437 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Prox1P48437 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Prox1P48437 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prox1P48437 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Prox1P48437 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Prox1P48437 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Prox1P48437 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Prox1P48437 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Prox1P48437 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Prox1P48437 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Prox1P48437 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.78□□□□□ -0.36
Prox1P48437 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Prox1P48437 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Prox1P48437 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.78□□□□□ -0.36
Prox1P48437 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Prox1P48437 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Prox1P48437 Mir6990-201ENSMUST00000183724 91 ntBASIC12.78□□□□□ -0.36
Prox1P48437 Gm18766-201ENSMUST00000189811 808 ntBASIC12.78□□□□□ -0.36
Prox1P48437 Gm43125-201ENSMUST00000201724 730 ntBASIC12.78□□□□□ -0.36
Prox1P48437 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC12.78□□□□□ -0.36
Prox1P48437 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC12.78□□□□□ -0.36
Prox1P48437 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.78□□□□□ -0.36
Prox1P48437 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Prox1P48437 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Prox1P48437 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Prox1P48437 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.78□□□□□ -0.36
Prox1P48437 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Prox1P48437 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Prox1P48437 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Prox1P48437 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Prox1P48437 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Prox1P48437 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Prox1P48437 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Prox1P48437 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Prox1P48437 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Prox1P48437 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.78□□□□□ -0.36
Prox1P48437 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms