Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Sox6P40645 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox6P40645 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox6P40645 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox6P40645 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox6P40645 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox6P40645 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.54□□□□□ -0.4
Sox6P40645 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox6P40645 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox6P40645 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox6P40645 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox6P40645 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox6P40645 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox6P40645 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.54□□□□□ -0.4
Sox6P40645 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Sox6P40645 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox6P40645 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Sox6P40645 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sox6P40645 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Sox6P40645 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox6P40645 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox6P40645 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox6P40645 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox6P40645 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox6P40645 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.53□□□□□ -0.4
Sox6P40645 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox6P40645 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.53□□□□□ -0.4
Sox6P40645 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox6P40645 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox6P40645 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox6P40645 Gm12585-201ENSMUST00000117307 290 ntBASIC12.53□□□□□ -0.4
Sox6P40645 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sox6P40645 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox6P40645 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.53□□□□□ -0.4
Sox6P40645 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.53□□□□□ -0.4
Sox6P40645 Gm21470-201ENSMUST00000187680 696 ntBASIC12.53□□□□□ -0.4
Sox6P40645 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sox6P40645 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC12.53□□□□□ -0.4
Sox6P40645 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.53□□□□□ -0.4
Sox6P40645 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox6P40645 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox6P40645 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox6P40645 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sox6P40645 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox6P40645 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox6P40645 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox6P40645 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Sox6P40645 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox6P40645 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sox6P40645 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.53□□□□□ -0.4
Sox6P40645 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Sox6P40645 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sox6P40645 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sox6P40645 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sox6P40645 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
Sox6P40645 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sox6P40645 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Sox6P40645 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sox6P40645 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sox6P40645 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sox6P40645 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sox6P40645 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Sox6P40645 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sox6P40645 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sox6P40645 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sox6P40645 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sox6P40645 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox6P40645 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox6P40645 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox6P40645 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sox6P40645 Gm12151-201ENSMUST00000121374 290 ntBASIC12.52□□□□□ -0.41
Sox6P40645 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Sox6P40645 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.52□□□□□ -0.41
Sox6P40645 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox6P40645 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sox6P40645 Auts2-212ENSMUST00000178555 309 ntBASIC12.52□□□□□ -0.41
Sox6P40645 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.52□□□□□ -0.41
Sox6P40645 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.52□□□□□ -0.41
Sox6P40645 Gm43703-201ENSMUST00000200523 763 ntBASIC12.52□□□□□ -0.41
Sox6P40645 Gm20949-201ENSMUST00000206478 952 ntBASIC12.52□□□□□ -0.41
Sox6P40645 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.52□□□□□ -0.41
Sox6P40645 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox6P40645 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Sox6P40645 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox6P40645 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.52□□□□□ -0.41
Sox6P40645 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox6P40645 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox6P40645 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox6P40645 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox6P40645 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox6P40645 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox6P40645 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sox6P40645 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.52□□□□□ -0.41
Sox6P40645 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sox6P40645 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox6P40645 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox6P40645 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Sox6P40645 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox6P40645 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sox6P40645 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms