Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Timp3P39876 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Timp3P39876 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Timp3P39876 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Timp3P39876 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Timp3P39876 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC10.95□□□□□ -0.66
Timp3P39876 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Timp3P39876 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC10.95□□□□□ -0.66
Timp3P39876 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Timp3P39876 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Timp3P39876 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Timp3P39876 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Timp3P39876 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Timp3P39876 Gm5069-202ENSMUST00000192714 1011 ntBASIC10.95□□□□□ -0.66
Timp3P39876 Gm38223-201ENSMUST00000194484 695 ntBASIC10.95□□□□□ -0.66
Timp3P39876 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Timp3P39876 Mir497b-201ENSMUST00000093601 125 ntBASIC10.95□□□□□ -0.66
Timp3P39876 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Timp3P39876 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Timp3P39876 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Timp3P39876 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC10.95□□□□□ -0.66
Timp3P39876 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Timp3P39876 AC115735.4-201ENSMUST00000227460 1944 ntBASIC10.95□□□□□ -0.66
Timp3P39876 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Timp3P39876 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Timp3P39876 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Timp3P39876 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Timp3P39876 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Timp3P39876 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Timp3P39876 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Timp3P39876 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Timp3P39876 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Timp3P39876 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Timp3P39876 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC10.95□□□□□ -0.66
Timp3P39876 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Timp3P39876 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Timp3P39876 Gm9347-201ENSMUST00000211473 1607 ntBASIC10.95□□□□□ -0.66
Timp3P39876 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Timp3P39876 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Timp3P39876 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Timp3P39876 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Timp3P39876 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Timp3P39876 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Timp3P39876 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Timp3P39876 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Timp3P39876 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Timp3P39876 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Timp3P39876 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Timp3P39876 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Timp3P39876 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Timp3P39876 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Timp3P39876 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC10.94□□□□□ -0.66
Timp3P39876 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Timp3P39876 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Timp3P39876 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Timp3P39876 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Timp3P39876 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Timp3P39876 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Timp3P39876 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Timp3P39876 Gm2495-201ENSMUST00000191160 466 ntBASIC10.94□□□□□ -0.66
Timp3P39876 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC10.94□□□□□ -0.66
Timp3P39876 Gm7287-201ENSMUST00000205267 602 ntBASIC10.94□□□□□ -0.66
Timp3P39876 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC10.94□□□□□ -0.66
Timp3P39876 Gm8463-201ENSMUST00000208573 613 ntBASIC10.94□□□□□ -0.66
Timp3P39876 AC154595.3-201ENSMUST00000224579 384 ntBASIC10.94□□□□□ -0.66
Timp3P39876 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Timp3P39876 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Timp3P39876 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC10.94□□□□□ -0.66
Timp3P39876 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Timp3P39876 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Timp3P39876 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Timp3P39876 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Timp3P39876 AC117194.1-201ENSMUST00000224847 3002 ntBASIC10.94□□□□□ -0.66
Timp3P39876 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Timp3P39876 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Timp3P39876 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Timp3P39876 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Timp3P39876 Gm45053-201ENSMUST00000206112 2499 ntBASIC10.94□□□□□ -0.66
Timp3P39876 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC10.94□□□□□ -0.66
Timp3P39876 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
Timp3P39876 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Timp3P39876 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Timp3P39876 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Timp3P39876 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Timp3P39876 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Timp3P39876 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
Timp3P39876 Gm42748-201ENSMUST00000199354 2341 ntBASIC10.93□□□□□ -0.66
Timp3P39876 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Timp3P39876 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Timp3P39876 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Timp3P39876 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Timp3P39876 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Timp3P39876 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Timp3P39876 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Timp3P39876 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Timp3P39876 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC10.93□□□□□ -0.66
Timp3P39876 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Timp3P39876 AC114008.2-201ENSMUST00000227699 1347 ntBASIC10.93□□□□□ -0.66
Timp3P39876 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Timp3P39876 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms