Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.29□□□□□ -0.28
LdlrP35951 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.29□□□□□ -0.28
LdlrP35951 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LdlrP35951 Gm21470-201ENSMUST00000187680 696 ntBASIC13.29□□□□□ -0.28
LdlrP35951 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LdlrP35951 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.29□□□□□ -0.28
LdlrP35951 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.29□□□□□ -0.28
LdlrP35951 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.29□□□□□ -0.28
LdlrP35951 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LdlrP35951 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
LdlrP35951 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.29□□□□□ -0.28
LdlrP35951 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LdlrP35951 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
LdlrP35951 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LdlrP35951 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LdlrP35951 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LdlrP35951 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
LdlrP35951 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LdlrP35951 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.29□□□□□ -0.28
LdlrP35951 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LdlrP35951 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LdlrP35951 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
LdlrP35951 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LdlrP35951 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LdlrP35951 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
LdlrP35951 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LdlrP35951 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LdlrP35951 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LdlrP35951 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LdlrP35951 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
LdlrP35951 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LdlrP35951 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LdlrP35951 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LdlrP35951 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LdlrP35951 Gm15460-201ENSMUST00000118147 391 ntBASIC13.28□□□□□ -0.28
LdlrP35951 Gm4875-201ENSMUST00000118257 786 ntBASIC13.28□□□□□ -0.28
LdlrP35951 Gm13385-201ENSMUST00000121089 220 ntBASIC13.28□□□□□ -0.28
LdlrP35951 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LdlrP35951 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.28□□□□□ -0.28
LdlrP35951 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LdlrP35951 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LdlrP35951 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LdlrP35951 Gm18018-201ENSMUST00000198273 408 ntBASIC13.28□□□□□ -0.28
LdlrP35951 Gm43703-201ENSMUST00000200523 763 ntBASIC13.28□□□□□ -0.28
LdlrP35951 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.28□□□□□ -0.28
LdlrP35951 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LdlrP35951 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.28□□□□□ -0.28
LdlrP35951 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.28□□□□□ -0.28
LdlrP35951 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
LdlrP35951 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LdlrP35951 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LdlrP35951 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LdlrP35951 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LdlrP35951 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LdlrP35951 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LdlrP35951 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
LdlrP35951 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.28□□□□□ -0.28
LdlrP35951 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
LdlrP35951 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LdlrP35951 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LdlrP35951 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LdlrP35951 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LdlrP35951 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.28□□□□□ -0.28
LdlrP35951 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
LdlrP35951 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LdlrP35951 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LdlrP35951 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LdlrP35951 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
LdlrP35951 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
LdlrP35951 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
LdlrP35951 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
LdlrP35951 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LdlrP35951 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LdlrP35951 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
LdlrP35951 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
LdlrP35951 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.27□□□□□ -0.28
LdlrP35951 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.28
LdlrP35951 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
LdlrP35951 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LdlrP35951 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LdlrP35951 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
LdlrP35951 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
LdlrP35951 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
LdlrP35951 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LdlrP35951 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.27□□□□□ -0.29
LdlrP35951 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
LdlrP35951 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
LdlrP35951 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
LdlrP35951 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.27□□□□□ -0.29
LdlrP35951 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
LdlrP35951 Gm20445-201ENSMUST00000061905 565 ntBASIC13.27□□□□□ -0.29
LdlrP35951 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
LdlrP35951 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
LdlrP35951 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
LdlrP35951 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LdlrP35951 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
LdlrP35951 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
LdlrP35951 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
LdlrP35951 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
LdlrP35951 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms