Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Rfc1P35601 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.04□□□□□ -0.16
Rfc1P35601 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.04□□□□□ -0.16
Rfc1P35601 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfc1P35601 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfc1P35601 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.04□□□□□ -0.16
Rfc1P35601 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Rfc1P35601 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfc1P35601 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfc1P35601 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfc1P35601 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rfc1P35601 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfc1P35601 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Rfc1P35601 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC14.04□□□□□ -0.16
Rfc1P35601 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rfc1P35601 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Rfc1P35601 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfc1P35601 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Rfc1P35601 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfc1P35601 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rfc1P35601 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Rfc1P35601 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rfc1P35601 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rfc1P35601 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Rfc1P35601 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfc1P35601 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfc1P35601 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfc1P35601 Gm28323-201ENSMUST00000186817 2499 ntBASIC14.03□□□□□ -0.16
Rfc1P35601 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfc1P35601 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfc1P35601 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rfc1P35601 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.03□□□□□ -0.16
Rfc1P35601 Gm2445-201ENSMUST00000182798 989 ntBASIC14.03□□□□□ -0.16
Rfc1P35601 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfc1P35601 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rfc1P35601 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.03□□□□□ -0.16
Rfc1P35601 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.03□□□□□ -0.16
Rfc1P35601 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.03□□□□□ -0.16
Rfc1P35601 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.03□□□□□ -0.16
Rfc1P35601 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Rfc1P35601 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Rfc1P35601 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rfc1P35601 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfc1P35601 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfc1P35601 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Rfc1P35601 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfc1P35601 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Rfc1P35601 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Rfc1P35601 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Rfc1P35601 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfc1P35601 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Rfc1P35601 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Rfc1P35601 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfc1P35601 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfc1P35601 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Rfc1P35601 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rfc1P35601 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC14.02□□□□□ -0.16
Rfc1P35601 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Rfc1P35601 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Rfc1P35601 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rfc1P35601 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rfc1P35601 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rfc1P35601 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rfc1P35601 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rfc1P35601 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rfc1P35601 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.02□□□□□ -0.16
Rfc1P35601 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rfc1P35601 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rfc1P35601 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.02□□□□□ -0.17
Rfc1P35601 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Rfc1P35601 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC14.02□□□□□ -0.17
Rfc1P35601 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Rfc1P35601 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rfc1P35601 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC14.02□□□□□ -0.17
Rfc1P35601 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.02□□□□□ -0.17
Rfc1P35601 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.02□□□□□ -0.17
Rfc1P35601 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rfc1P35601 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rfc1P35601 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rfc1P35601 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.02□□□□□ -0.17
Rfc1P35601 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rfc1P35601 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Rfc1P35601 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rfc1P35601 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rfc1P35601 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rfc1P35601 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rfc1P35601 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rfc1P35601 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rfc1P35601 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rfc1P35601 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rfc1P35601 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rfc1P35601 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfc1P35601 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rfc1P35601 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rfc1P35601 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rfc1P35601 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rfc1P35601 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Rfc1P35601 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rfc1P35601 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rfc1P35601 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms