Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Mmp3P28862 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mmp3P28862 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Mmp3P28862 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Mmp3P28862 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.22□□□□□ -0.13
Mmp3P28862 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Mmp3P28862 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Mmp3P28862 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC14.22□□□□□ -0.13
Mmp3P28862 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC14.22□□□□□ -0.13
Mmp3P28862 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Mmp3P28862 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Mmp3P28862 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC14.22□□□□□ -0.13
Mmp3P28862 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mmp3P28862 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mmp3P28862 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mmp3P28862 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mmp3P28862 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Mmp3P28862 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mmp3P28862 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mmp3P28862 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Mmp3P28862 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mmp3P28862 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mmp3P28862 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Mmp3P28862 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.21□□□□□ -0.13
Mmp3P28862 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mmp3P28862 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Mmp3P28862 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mmp3P28862 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.21□□□□□ -0.13
Mmp3P28862 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mmp3P28862 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mmp3P28862 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Mmp3P28862 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mmp3P28862 Gm6203-201ENSMUST00000209575 1342 ntBASIC14.21□□□□□ -0.13
Mmp3P28862 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Mmp3P28862 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.21□□□□□ -0.13
Mmp3P28862 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mmp3P28862 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Mmp3P28862 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Mmp3P28862 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mmp3P28862 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mmp3P28862 Gm9431-201ENSMUST00000119765 1051 ntBASIC14.21□□□□□ -0.13
Mmp3P28862 Gm7809-201ENSMUST00000153199 742 ntBASIC14.21□□□□□ -0.13
Mmp3P28862 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Mmp3P28862 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Mmp3P28862 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC14.21□□□□□ -0.13
Mmp3P28862 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC14.21□□□□□ -0.13
Mmp3P28862 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Mmp3P28862 Gm4768-201ENSMUST00000206199 686 ntBASIC14.21□□□□□ -0.13
Mmp3P28862 Olfr284-202ENSMUST00000206647 966 ntBASIC14.21□□□□□ -0.13
Mmp3P28862 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Mmp3P28862 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC14.21□□□□□ -0.13
Mmp3P28862 AC154171.1-201ENSMUST00000224610 643 ntBASIC14.21□□□□□ -0.13
Mmp3P28862 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mmp3P28862 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Mmp3P28862 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mmp3P28862 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mmp3P28862 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mmp3P28862 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Mmp3P28862 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mmp3P28862 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC14.21□□□□□ -0.13
Mmp3P28862 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Mmp3P28862 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Mmp3P28862 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Mmp3P28862 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
Mmp3P28862 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Mmp3P28862 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Mmp3P28862 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC14.21□□□□□ -0.14
Mmp3P28862 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Mmp3P28862 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp3P28862 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC14.2□□□□□ -0.14
Mmp3P28862 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp3P28862 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp3P28862 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp3P28862 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp3P28862 Gm8793-201ENSMUST00000183069 1303 ntBASIC14.2□□□□□ -0.14
Mmp3P28862 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp3P28862 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Mmp3P28862 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.2□□□□□ -0.14
Mmp3P28862 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp3P28862 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Mmp3P28862 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Mmp3P28862 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp3P28862 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Mmp3P28862 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp3P28862 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp3P28862 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp3P28862 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp3P28862 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC14.2□□□□□ -0.14
Mmp3P28862 Gm37042-201ENSMUST00000193816 581 ntBASIC14.2□□□□□ -0.14
Mmp3P28862 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC14.2□□□□□ -0.14
Mmp3P28862 AC135669.1-202ENSMUST00000216742 540 ntBASIC14.2□□□□□ -0.14
Mmp3P28862 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp3P28862 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp3P28862 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Mmp3P28862 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp3P28862 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp3P28862 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp3P28862 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Mmp3P28862 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC14.2□□□□□ -0.14
Mmp3P28862 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms