Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col8a2P25318 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col8a2P25318 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Col8a2P25318 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col8a2P25318 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Col8a2P25318 Gm10156-201ENSMUST00000122364 462 ntBASIC11.12□□□□□ -0.63
Col8a2P25318 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC11.12□□□□□ -0.63
Col8a2P25318 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Col8a2P25318 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.12□□□□□ -0.63
Col8a2P25318 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Col8a2P25318 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC11.12□□□□□ -0.63
Col8a2P25318 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC11.12□□□□□ -0.63
Col8a2P25318 Gm18062-201ENSMUST00000208020 547 ntBASIC11.12□□□□□ -0.63
Col8a2P25318 Gm18055-201ENSMUST00000208254 547 ntBASIC11.12□□□□□ -0.63
Col8a2P25318 Gm40466-201ENSMUST00000212174 422 ntBASIC11.12□□□□□ -0.63
Col8a2P25318 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col8a2P25318 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col8a2P25318 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col8a2P25318 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Col8a2P25318 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col8a2P25318 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col8a2P25318 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC11.12□□□□□ -0.63
Col8a2P25318 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Col8a2P25318 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col8a2P25318 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.12□□□□□ -0.63
Col8a2P25318 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col8a2P25318 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col8a2P25318 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Col8a2P25318 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col8a2P25318 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.12□□□□□ -0.63
Col8a2P25318 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.12□□□□□ -0.63
Col8a2P25318 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Col8a2P25318 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col8a2P25318 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col8a2P25318 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.11□□□□□ -0.63
Col8a2P25318 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col8a2P25318 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col8a2P25318 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col8a2P25318 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col8a2P25318 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Col8a2P25318 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col8a2P25318 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col8a2P25318 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col8a2P25318 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col8a2P25318 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Col8a2P25318 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col8a2P25318 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col8a2P25318 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col8a2P25318 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col8a2P25318 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.11□□□□□ -0.63
Col8a2P25318 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC11.11□□□□□ -0.63
Col8a2P25318 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col8a2P25318 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col8a2P25318 Gm12957-201ENSMUST00000117835 377 ntBASIC11.11□□□□□ -0.63
Col8a2P25318 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.11□□□□□ -0.63
Col8a2P25318 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC11.11□□□□□ -0.63
Col8a2P25318 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col8a2P25318 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col8a2P25318 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC11.11□□□□□ -0.63
Col8a2P25318 Gm38230-201ENSMUST00000193572 1159 ntBASIC11.11□□□□□ -0.63
Col8a2P25318 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC11.11□□□□□ -0.63
Col8a2P25318 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.11□□□□□ -0.63
Col8a2P25318 Gm29705-201ENSMUST00000212598 474 ntBASIC11.11□□□□□ -0.63
Col8a2P25318 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col8a2P25318 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col8a2P25318 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Col8a2P25318 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.11□□□□□ -0.63
Col8a2P25318 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.11□□□□□ -0.63
Col8a2P25318 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Col8a2P25318 Gm14608-201ENSMUST00000120030 1553 ntBASIC11.11□□□□□ -0.63
Col8a2P25318 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col8a2P25318 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Col8a2P25318 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col8a2P25318 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col8a2P25318 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Col8a2P25318 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11.11□□□□□ -0.63
Col8a2P25318 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Col8a2P25318 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Col8a2P25318 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Col8a2P25318 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Col8a2P25318 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.1□□□□□ -0.63
Col8a2P25318 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col8a2P25318 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col8a2P25318 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col8a2P25318 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col8a2P25318 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Col8a2P25318 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Col8a2P25318 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col8a2P25318 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col8a2P25318 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC11.1□□□□□ -0.63
Col8a2P25318 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Col8a2P25318 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Col8a2P25318 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.1□□□□□ -0.63
Col8a2P25318 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC11.1□□□□□ -0.63
Col8a2P25318 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Col8a2P25318 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col8a2P25318 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.1□□□□□ -0.63
Col8a2P25318 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Col8a2P25318 Gm8565-201ENSMUST00000183259 1014 ntBASIC11.1□□□□□ -0.63
Col8a2P25318 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms