Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Gm45167-201ENSMUST00000208007 322 ntBASIC12.13□□□□□ -0.47
Cbx3P23198 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC12.13□□□□□ -0.47
Cbx3P23198 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cbx3P23198 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Cbx3P23198 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Cbx3P23198 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.13□□□□□ -0.47
Cbx3P23198 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cbx3P23198 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cbx3P23198 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cbx3P23198 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cbx3P23198 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Cbx3P23198 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Cbx3P23198 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cbx3P23198 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cbx3P23198 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cbx3P23198 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cbx3P23198 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cbx3P23198 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cbx3P23198 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cbx3P23198 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cbx3P23198 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cbx3P23198 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cbx3P23198 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cbx3P23198 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cbx3P23198 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cbx3P23198 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cbx3P23198 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Cbx3P23198 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cbx3P23198 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.12□□□□□ -0.47
Cbx3P23198 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Cbx3P23198 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cbx3P23198 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cbx3P23198 Gm15593-201ENSMUST00000122085 1008 ntBASIC12.12□□□□□ -0.47
Cbx3P23198 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cbx3P23198 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cbx3P23198 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cbx3P23198 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC12.12□□□□□ -0.47
Cbx3P23198 Gm17971-201ENSMUST00000190239 806 ntBASIC12.12□□□□□ -0.47
Cbx3P23198 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cbx3P23198 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC12.12□□□□□ -0.47
Cbx3P23198 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cbx3P23198 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cbx3P23198 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cbx3P23198 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cbx3P23198 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Cbx3P23198 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Cbx3P23198 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cbx3P23198 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Cbx3P23198 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cbx3P23198 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cbx3P23198 CT025681.1-201ENSMUST00000225453 1855 ntBASIC12.12□□□□□ -0.47
Cbx3P23198 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.12□□□□□ -0.47
Cbx3P23198 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.12□□□□□ -0.47
Cbx3P23198 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cbx3P23198 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Cbx3P23198 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cbx3P23198 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.12□□□□□ -0.47
Cbx3P23198 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.11□□□□□ -0.47
Cbx3P23198 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cbx3P23198 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cbx3P23198 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cbx3P23198 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cbx3P23198 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cbx3P23198 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.11□□□□□ -0.47
Cbx3P23198 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cbx3P23198 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cbx3P23198 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cbx3P23198 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cbx3P23198 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cbx3P23198 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cbx3P23198 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cbx3P23198 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cbx3P23198 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cbx3P23198 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Cbx3P23198 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cbx3P23198 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cbx3P23198 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cbx3P23198 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.11□□□□□ -0.47
Cbx3P23198 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cbx3P23198 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cbx3P23198 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC12.11□□□□□ -0.47
Cbx3P23198 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Cbx3P23198 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC12.11□□□□□ -0.47
Cbx3P23198 Gm5864-201ENSMUST00000202263 970 ntBASIC12.11□□□□□ -0.47
Cbx3P23198 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cbx3P23198 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cbx3P23198 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cbx3P23198 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cbx3P23198 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cbx3P23198 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cbx3P23198 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC12.11□□□□□ -0.47
Cbx3P23198 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cbx3P23198 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cbx3P23198 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cbx3P23198 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cbx3P23198 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cbx3P23198 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cbx3P23198 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Cbx3P23198 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cbx3P23198 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms