Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clk1P22518 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Clk1P22518 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Clk1P22518 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clk1P22518 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clk1P22518 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.5□□□□□ -0.41
Clk1P22518 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clk1P22518 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Clk1P22518 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clk1P22518 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Clk1P22518 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clk1P22518 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Clk1P22518 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Clk1P22518 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Clk1P22518 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clk1P22518 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Clk1P22518 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clk1P22518 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clk1P22518 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Clk1P22518 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clk1P22518 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clk1P22518 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clk1P22518 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clk1P22518 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.49□□□□□ -0.41
Clk1P22518 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clk1P22518 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clk1P22518 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clk1P22518 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Clk1P22518 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.49□□□□□ -0.41
Clk1P22518 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clk1P22518 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.49□□□□□ -0.41
Clk1P22518 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clk1P22518 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Clk1P22518 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Clk1P22518 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.49□□□□□ -0.41
Clk1P22518 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.49□□□□□ -0.41
Clk1P22518 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.49□□□□□ -0.41
Clk1P22518 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.49□□□□□ -0.41
Clk1P22518 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Clk1P22518 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Clk1P22518 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.49□□□□□ -0.41
Clk1P22518 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.49□□□□□ -0.41
Clk1P22518 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clk1P22518 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clk1P22518 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clk1P22518 Gm43375-201ENSMUST00000196705 2480 ntBASIC12.49□□□□□ -0.41
Clk1P22518 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Clk1P22518 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Clk1P22518 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.49□□□□□ -0.41
Clk1P22518 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.49□□□□□ -0.41
Clk1P22518 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clk1P22518 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clk1P22518 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Clk1P22518 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clk1P22518 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clk1P22518 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clk1P22518 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clk1P22518 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clk1P22518 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clk1P22518 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Clk1P22518 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Clk1P22518 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Clk1P22518 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Clk1P22518 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.48□□□□□ -0.41
Clk1P22518 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.48□□□□□ -0.41
Clk1P22518 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clk1P22518 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.48□□□□□ -0.41
Clk1P22518 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Clk1P22518 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Clk1P22518 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Clk1P22518 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Clk1P22518 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clk1P22518 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Clk1P22518 Gm20949-201ENSMUST00000206478 952 ntBASIC12.48□□□□□ -0.41
Clk1P22518 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.48□□□□□ -0.41
Clk1P22518 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.48□□□□□ -0.41
Clk1P22518 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Clk1P22518 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clk1P22518 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clk1P22518 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Clk1P22518 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clk1P22518 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Clk1P22518 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
Clk1P22518 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Clk1P22518 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.48□□□□□ -0.41
Clk1P22518 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Clk1P22518 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clk1P22518 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clk1P22518 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clk1P22518 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Clk1P22518 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clk1P22518 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clk1P22518 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clk1P22518 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Clk1P22518 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clk1P22518 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clk1P22518 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Clk1P22518 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Clk1P22518 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.47□□□□□ -0.41
Clk1P22518 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms