Protein–RNA interactions for Protein: P16388

Kcna1, Potassium voltage-gated channel subfamily A member 1, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcna1P16388 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC15.12■□□□□ 0.01
Kcna1P16388 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Kcna1P16388 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Kcna1P16388 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Kcna1P16388 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Kcna1P16388 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Kcna1P16388 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Kcna1P16388 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Kcna1P16388 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Kcna1P16388 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Kcna1P16388 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Kcna1P16388 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Kcna1P16388 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Kcna1P16388 Gm6161-201ENSMUST00000121942 1102 ntBASIC15.11■□□□□ 0.01
Kcna1P16388 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Kcna1P16388 Gm6254-201ENSMUST00000168178 1072 ntBASIC15.11■□□□□ 0.01
Kcna1P16388 Gm6153-201ENSMUST00000172004 1058 ntBASIC15.11■□□□□ 0.01
Kcna1P16388 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC15.11■□□□□ 0.01
Kcna1P16388 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Kcna1P16388 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Kcna1P16388 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC15.11■□□□□ 0.01
Kcna1P16388 Gm5641-202ENSMUST00000198699 1080 ntBASIC15.11■□□□□ 0.01
Kcna1P16388 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Kcna1P16388 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Kcna1P16388 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC15.11■□□□□ 0.01
Kcna1P16388 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC15.11■□□□□ 0.01
Kcna1P16388 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC15.11■□□□□ 0.01
Kcna1P16388 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC15.11■□□□□ 0.01
Kcna1P16388 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Kcna1P16388 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Kcna1P16388 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Kcna1P16388 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Kcna1P16388 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Kcna1P16388 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Kcna1P16388 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Kcna1P16388 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Kcna1P16388 Gm44065-201ENSMUST00000203184 3527 ntBASIC15.1■□□□□ 0.01
Kcna1P16388 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Kcna1P16388 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC15.1■□□□□ 0.01
Kcna1P16388 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Kcna1P16388 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Kcna1P16388 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Kcna1P16388 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Kcna1P16388 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Kcna1P16388 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Kcna1P16388 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Kcna1P16388 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Kcna1P16388 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC15.1■□□□□ 0.01
Kcna1P16388 Gm13123-201ENSMUST00000122173 492 ntBASIC15.1■□□□□ 0.01
Kcna1P16388 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC15.1■□□□□ 0.01
Kcna1P16388 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC15.1■□□□□ 0.01
Kcna1P16388 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Kcna1P16388 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Kcna1P16388 Gm38230-201ENSMUST00000193572 1159 ntBASIC15.1■□□□□ 0.01
Kcna1P16388 Gm29705-201ENSMUST00000212598 474 ntBASIC15.1■□□□□ 0.01
Kcna1P16388 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Kcna1P16388 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Kcna1P16388 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Kcna1P16388 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Kcna1P16388 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Kcna1P16388 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Kcna1P16388 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Kcna1P16388 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Kcna1P16388 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC15.09■□□□□ 0.01
Kcna1P16388 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Kcna1P16388 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Kcna1P16388 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Kcna1P16388 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Kcna1P16388 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Kcna1P16388 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Kcna1P16388 Gm8805-201ENSMUST00000117848 313 ntBASIC15.09■□□□□ 0.01
Kcna1P16388 Gm11618-201ENSMUST00000117946 267 ntBASIC15.09■□□□□ 0.01
Kcna1P16388 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Kcna1P16388 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Kcna1P16388 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC15.09■□□□□ 0.01
Kcna1P16388 AC122305.4-201ENSMUST00000216159 1206 ntBASIC15.09■□□□□ 0.01
Kcna1P16388 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Kcna1P16388 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Kcna1P16388 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Kcna1P16388 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Kcna1P16388 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Kcna1P16388 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC15.09■□□□□ 0.01
Kcna1P16388 Gm43423-201ENSMUST00000198390 2094 ntBASIC15.08■□□□□ 0.01
Kcna1P16388 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Kcna1P16388 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC15.08■□□□□ 0.01
Kcna1P16388 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Kcna1P16388 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Kcna1P16388 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Kcna1P16388 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0.01
Kcna1P16388 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Kcna1P16388 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Kcna1P16388 Gm45684-201ENSMUST00000210244 1571 ntBASIC15.08■□□□□ 0
Kcna1P16388 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Kcna1P16388 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC15.08■□□□□ 0
Kcna1P16388 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC15.08■□□□□ 0
Kcna1P16388 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC15.08■□□□□ 0
Kcna1P16388 Mir1982-201ENSMUST00000157368 74 ntBASIC15.08■□□□□ 0
Kcna1P16388 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC15.08■□□□□ 0
Kcna1P16388 Gm37497-201ENSMUST00000195830 798 ntBASIC15.08■□□□□ 0
Kcna1P16388 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms