Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc8P09025 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc8P09025 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Hoxc8P09025 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Hoxc8P09025 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Hoxc8P09025 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hoxc8P09025 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.06□□□□□ -0.16
Hoxc8P09025 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc8P09025 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc8P09025 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.06□□□□□ -0.16
Hoxc8P09025 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc8P09025 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Hoxc8P09025 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc8P09025 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc8P09025 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc8P09025 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc8P09025 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc8P09025 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc8P09025 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc8P09025 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc8P09025 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc8P09025 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc8P09025 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc8P09025 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc8P09025 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc8P09025 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc8P09025 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc8P09025 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc8P09025 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc8P09025 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC14.06□□□□□ -0.16
Hoxc8P09025 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC14.06□□□□□ -0.16
Hoxc8P09025 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc8P09025 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC14.06□□□□□ -0.16
Hoxc8P09025 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc8P09025 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Hoxc8P09025 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc8P09025 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Hoxc8P09025 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc8P09025 Gm19931-201ENSMUST00000198920 368 ntBASIC14.06□□□□□ -0.16
Hoxc8P09025 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC14.06□□□□□ -0.16
Hoxc8P09025 Gm5363-201ENSMUST00000211927 938 ntBASIC14.06□□□□□ -0.16
Hoxc8P09025 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC14.06□□□□□ -0.16
Hoxc8P09025 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC14.06□□□□□ -0.16
Hoxc8P09025 Mettl6-204ENSMUST00000227595 1027 ntBASIC14.06□□□□□ -0.16
Hoxc8P09025 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc8P09025 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc8P09025 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc8P09025 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc8P09025 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc8P09025 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.06□□□□□ -0.16
Hoxc8P09025 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Hoxc8P09025 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc8P09025 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc8P09025 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Hoxc8P09025 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc8P09025 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc8P09025 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc8P09025 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hoxc8P09025 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc8P09025 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc8P09025 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.05□□□□□ -0.16
Hoxc8P09025 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc8P09025 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc8P09025 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc8P09025 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc8P09025 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc8P09025 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc8P09025 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc8P09025 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc8P09025 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc8P09025 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.05□□□□□ -0.16
Hoxc8P09025 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC14.05□□□□□ -0.16
Hoxc8P09025 Gm11930-201ENSMUST00000117788 190 ntBASIC14.05□□□□□ -0.16
Hoxc8P09025 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc8P09025 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc8P09025 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Hoxc8P09025 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC14.05□□□□□ -0.16
Hoxc8P09025 Gm23363-201ENSMUST00000175024 79 ntBASIC14.05□□□□□ -0.16
Hoxc8P09025 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC14.05□□□□□ -0.16
Hoxc8P09025 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC14.05□□□□□ -0.16
Hoxc8P09025 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc8P09025 CT030182.1-201ENSMUST00000225935 533 ntBASIC14.05□□□□□ -0.16
Hoxc8P09025 AC126253.1-202ENSMUST00000226732 835 ntBASIC14.05□□□□□ -0.16
Hoxc8P09025 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc8P09025 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc8P09025 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc8P09025 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Hoxc8P09025 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc8P09025 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Hoxc8P09025 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.05□□□□□ -0.16
Hoxc8P09025 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc8P09025 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc8P09025 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc8P09025 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc8P09025 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Hoxc8P09025 Gm7789-202ENSMUST00000211273 1400 ntBASIC14.05□□□□□ -0.16
Hoxc8P09025 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc8P09025 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hoxc8P09025 Gm10782-202ENSMUST00000223775 1480 ntBASIC14.05□□□□□ -0.16
Hoxc8P09025 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms