Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
IghmP01872 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
IghmP01872 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
IghmP01872 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
IghmP01872 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
IghmP01872 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
IghmP01872 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
IghmP01872 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
IghmP01872 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
IghmP01872 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
IghmP01872 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
IghmP01872 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.49□□□□□ -0.41
IghmP01872 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
IghmP01872 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
IghmP01872 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.49□□□□□ -0.41
IghmP01872 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
IghmP01872 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
IghmP01872 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
IghmP01872 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
IghmP01872 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
IghmP01872 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
IghmP01872 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
IghmP01872 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
IghmP01872 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
IghmP01872 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
IghmP01872 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
IghmP01872 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.49□□□□□ -0.41
IghmP01872 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
IghmP01872 Gm28760-201ENSMUST00000185995 736 ntBASIC12.49□□□□□ -0.41
IghmP01872 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.49□□□□□ -0.41
IghmP01872 Gm19931-201ENSMUST00000198920 368 ntBASIC12.49□□□□□ -0.41
IghmP01872 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
IghmP01872 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
IghmP01872 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
IghmP01872 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
IghmP01872 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
IghmP01872 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
IghmP01872 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
IghmP01872 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
IghmP01872 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
IghmP01872 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
IghmP01872 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.49□□□□□ -0.41
IghmP01872 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
IghmP01872 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
IghmP01872 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
IghmP01872 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
IghmP01872 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
IghmP01872 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.48□□□□□ -0.41
IghmP01872 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.48□□□□□ -0.41
IghmP01872 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
IghmP01872 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.48□□□□□ -0.41
IghmP01872 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
IghmP01872 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
IghmP01872 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
IghmP01872 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
IghmP01872 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
IghmP01872 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.48□□□□□ -0.41
IghmP01872 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
IghmP01872 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
IghmP01872 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
IghmP01872 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
IghmP01872 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
IghmP01872 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
IghmP01872 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
IghmP01872 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
IghmP01872 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
IghmP01872 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
IghmP01872 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
IghmP01872 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
IghmP01872 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.48□□□□□ -0.41
IghmP01872 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.48□□□□□ -0.41
IghmP01872 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
IghmP01872 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.48□□□□□ -0.41
IghmP01872 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
IghmP01872 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
IghmP01872 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.48□□□□□ -0.41
IghmP01872 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
IghmP01872 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
IghmP01872 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
IghmP01872 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
IghmP01872 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.48□□□□□ -0.41
IghmP01872 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
IghmP01872 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
IghmP01872 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
IghmP01872 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.48□□□□□ -0.41
IghmP01872 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
IghmP01872 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
IghmP01872 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
IghmP01872 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
IghmP01872 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.48□□□□□ -0.41
IghmP01872 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
IghmP01872 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.47□□□□□ -0.41
IghmP01872 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.47□□□□□ -0.41
IghmP01872 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
IghmP01872 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
IghmP01872 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
IghmP01872 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
IghmP01872 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
IghmP01872 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
IghmP01872 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms