Protein–RNA interactions for Protein: P01810

Ig heavy chain V region J539, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01810 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
P01810 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P01810 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P01810 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P01810 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
P01810 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
P01810 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
P01810 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
P01810 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
P01810 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
P01810 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P01810 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P01810 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
P01810 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
P01810 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
P01810 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
P01810 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
P01810 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.3□□□□□ -0.28
P01810 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
P01810 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
P01810 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
P01810 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.3□□□□□ -0.28
P01810 Gm16177-201ENSMUST00000120728 718 ntBASIC13.3□□□□□ -0.28
P01810 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
P01810 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P01810 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC13.3□□□□□ -0.28
P01810 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
P01810 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.3□□□□□ -0.28
P01810 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.3□□□□□ -0.28
P01810 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P01810 Gm25857-201ENSMUST00000082788 129 ntBASIC13.3□□□□□ -0.28
P01810 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
P01810 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
P01810 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
P01810 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.3□□□□□ -0.28
P01810 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P01810 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.3□□□□□ -0.28
P01810 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P01810 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
P01810 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P01810 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
P01810 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.3□□□□□ -0.28
P01810 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
P01810 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
P01810 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P01810 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
P01810 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P01810 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.3□□□□□ -0.28
P01810 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
P01810 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.29□□□□□ -0.28
P01810 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P01810 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
P01810 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P01810 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.29□□□□□ -0.28
P01810 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P01810 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.29□□□□□ -0.28
P01810 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P01810 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P01810 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
P01810 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
P01810 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P01810 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
P01810 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.29□□□□□ -0.28
P01810 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P01810 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
P01810 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
P01810 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
P01810 Gm15824-201ENSMUST00000119516 955 ntBASIC13.29□□□□□ -0.28
P01810 Gm11425-201ENSMUST00000119608 498 ntBASIC13.29□□□□□ -0.28
P01810 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P01810 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC13.29□□□□□ -0.28
P01810 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.29□□□□□ -0.28
P01810 Gm4271-201ENSMUST00000174444 973 ntBASIC13.29□□□□□ -0.28
P01810 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13.29□□□□□ -0.28
P01810 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.29□□□□□ -0.28
P01810 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.29□□□□□ -0.28
P01810 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P01810 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P01810 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P01810 Gm9396-201ENSMUST00000076703 567 ntBASIC13.29□□□□□ -0.28
P01810 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P01810 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
P01810 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P01810 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P01810 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
P01810 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
P01810 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
P01810 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.29□□□□□ -0.28
P01810 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.29□□□□□ -0.28
P01810 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.29□□□□□ -0.28
P01810 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
P01810 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
P01810 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
P01810 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P01810 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
P01810 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P01810 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
P01810 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
P01810 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.28□□□□□ -0.28
P01810 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms