Protein–RNA interactions for Protein: P01572

Ifna1, Interferon alpha-1, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna1P01572 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ifna1P01572 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ifna1P01572 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ifna1P01572 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ifna1P01572 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ifna1P01572 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ifna1P01572 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ifna1P01572 AC117194.1-201ENSMUST00000224847 3002 ntBASIC11.24□□□□□ -0.61
Ifna1P01572 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ifna1P01572 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ifna1P01572 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC11.24□□□□□ -0.61
Ifna1P01572 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Ifna1P01572 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Ifna1P01572 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ifna1P01572 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ifna1P01572 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ifna1P01572 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ifna1P01572 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ifna1P01572 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Ifna1P01572 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC11.23□□□□□ -0.61
Ifna1P01572 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ifna1P01572 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.23□□□□□ -0.61
Ifna1P01572 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ifna1P01572 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ifna1P01572 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Ifna1P01572 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Ifna1P01572 Gm11779-201ENSMUST00000118541 368 ntBASIC11.23□□□□□ -0.61
Ifna1P01572 Gm12428-201ENSMUST00000119844 727 ntBASIC11.23□□□□□ -0.61
Ifna1P01572 Gm4804-201ENSMUST00000182234 999 ntBASIC11.23□□□□□ -0.61
Ifna1P01572 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Ifna1P01572 Gm43125-201ENSMUST00000201724 730 ntBASIC11.23□□□□□ -0.61
Ifna1P01572 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC11.23□□□□□ -0.61
Ifna1P01572 Gm18206-201ENSMUST00000207027 926 ntBASIC11.23□□□□□ -0.61
Ifna1P01572 AC156016.3-201ENSMUST00000228623 344 ntBASIC11.23□□□□□ -0.61
Ifna1P01572 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ifna1P01572 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ifna1P01572 Gm15500-202ENSMUST00000071641 1019 ntBASIC11.23□□□□□ -0.61
Ifna1P01572 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Ifna1P01572 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Ifna1P01572 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Ifna1P01572 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ifna1P01572 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ifna1P01572 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ifna1P01572 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ifna1P01572 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ifna1P01572 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ifna1P01572 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ifna1P01572 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ifna1P01572 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Ifna1P01572 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Ifna1P01572 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC11.23□□□□□ -0.61
Ifna1P01572 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Ifna1P01572 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Ifna1P01572 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.22□□□□□ -0.61
Ifna1P01572 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ifna1P01572 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ifna1P01572 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ifna1P01572 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ifna1P01572 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.22□□□□□ -0.61
Ifna1P01572 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ifna1P01572 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ifna1P01572 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ifna1P01572 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ifna1P01572 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
Ifna1P01572 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ifna1P01572 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
Ifna1P01572 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Ifna1P01572 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ifna1P01572 Mir1897-201ENSMUST00000122581 272 ntBASIC11.22□□□□□ -0.61
Ifna1P01572 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ifna1P01572 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC11.22□□□□□ -0.61
Ifna1P01572 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Ifna1P01572 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ifna1P01572 Gm24420-201ENSMUST00000176676 59 ntBASIC11.22□□□□□ -0.61
Ifna1P01572 Mir6990-201ENSMUST00000183724 91 ntBASIC11.22□□□□□ -0.61
Ifna1P01572 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ifna1P01572 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.22□□□□□ -0.61
Ifna1P01572 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC11.22□□□□□ -0.61
Ifna1P01572 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC11.22□□□□□ -0.61
Ifna1P01572 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC11.22□□□□□ -0.61
Ifna1P01572 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ifna1P01572 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ifna1P01572 AC124549.3-201ENSMUST00000225541 367 ntBASIC11.22□□□□□ -0.61
Ifna1P01572 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ifna1P01572 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ifna1P01572 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ifna1P01572 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ifna1P01572 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ifna1P01572 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ifna1P01572 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Ifna1P01572 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ifna1P01572 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.22□□□□□ -0.61
Ifna1P01572 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ifna1P01572 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Ifna1P01572 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Ifna1P01572 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
Ifna1P01572 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ifna1P01572 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Ifna1P01572 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Ifna1P01572 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms