Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syn1O88935 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syn1O88935 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syn1O88935 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syn1O88935 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syn1O88935 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Syn1O88935 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syn1O88935 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syn1O88935 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syn1O88935 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Syn1O88935 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Syn1O88935 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syn1O88935 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Syn1O88935 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syn1O88935 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
Syn1O88935 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syn1O88935 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syn1O88935 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syn1O88935 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Syn1O88935 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syn1O88935 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Syn1O88935 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syn1O88935 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syn1O88935 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Syn1O88935 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Syn1O88935 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC13.7□□□□□ -0.22
Syn1O88935 Gm24548-201ENSMUST00000158650 108 ntBASIC13.7□□□□□ -0.22
Syn1O88935 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC13.7□□□□□ -0.22
Syn1O88935 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.7□□□□□ -0.22
Syn1O88935 AC140293.1-201ENSMUST00000225626 1247 ntBASIC13.7□□□□□ -0.22
Syn1O88935 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syn1O88935 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Syn1O88935 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.7□□□□□ -0.22
Syn1O88935 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Syn1O88935 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Syn1O88935 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Syn1O88935 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syn1O88935 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Syn1O88935 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Syn1O88935 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Syn1O88935 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Syn1O88935 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Syn1O88935 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Syn1O88935 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Syn1O88935 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Syn1O88935 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Syn1O88935 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Syn1O88935 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Syn1O88935 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Syn1O88935 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.69□□□□□ -0.22
Syn1O88935 Gm23270-201ENSMUST00000104055 131 ntBASIC13.69□□□□□ -0.22
Syn1O88935 Selenot-ps-201ENSMUST00000119098 593 ntBASIC13.69□□□□□ -0.22
Syn1O88935 Gm8566-201ENSMUST00000120174 465 ntBASIC13.69□□□□□ -0.22
Syn1O88935 Gm12403-201ENSMUST00000121384 959 ntBASIC13.69□□□□□ -0.22
Syn1O88935 Gm16479-201ENSMUST00000121706 932 ntBASIC13.69□□□□□ -0.22
Syn1O88935 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Syn1O88935 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.69□□□□□ -0.22
Syn1O88935 Gm13316-201ENSMUST00000140537 691 ntBASIC13.69□□□□□ -0.22
Syn1O88935 Gm26185-201ENSMUST00000157692 266 ntBASIC13.69□□□□□ -0.22
Syn1O88935 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.69□□□□□ -0.22
Syn1O88935 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Syn1O88935 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC13.69□□□□□ -0.22
Syn1O88935 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Syn1O88935 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Syn1O88935 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC13.69□□□□□ -0.22
Syn1O88935 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Syn1O88935 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.69□□□□□ -0.22
Syn1O88935 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Syn1O88935 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
Syn1O88935 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.69□□□□□ -0.22
Syn1O88935 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Syn1O88935 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Syn1O88935 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Syn1O88935 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Syn1O88935 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Syn1O88935 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Syn1O88935 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Syn1O88935 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Syn1O88935 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Syn1O88935 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Syn1O88935 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Syn1O88935 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Syn1O88935 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Syn1O88935 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Syn1O88935 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Syn1O88935 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Syn1O88935 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Syn1O88935 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Syn1O88935 CU062626.3-201ENSMUST00000225522 1411 ntBASIC13.68□□□□□ -0.22
Syn1O88935 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Syn1O88935 Gm13611-201ENSMUST00000118269 318 ntBASIC13.68□□□□□ -0.22
Syn1O88935 Gm13813-201ENSMUST00000120998 787 ntBASIC13.68□□□□□ -0.22
Syn1O88935 Gm12363-201ENSMUST00000122250 668 ntBASIC13.68□□□□□ -0.22
Syn1O88935 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Syn1O88935 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Syn1O88935 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Syn1O88935 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC13.68□□□□□ -0.22
Syn1O88935 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Syn1O88935 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Syn1O88935 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms