Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Hcn1O88704 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hcn1O88704 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Hcn1O88704 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.79□□□□□ -0.36
Hcn1O88704 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hcn1O88704 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hcn1O88704 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Hcn1O88704 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hcn1O88704 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hcn1O88704 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hcn1O88704 Gm6912-201ENSMUST00000117218 544 ntBASIC12.79□□□□□ -0.36
Hcn1O88704 Gm15240-201ENSMUST00000118156 720 ntBASIC12.79□□□□□ -0.36
Hcn1O88704 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hcn1O88704 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Hcn1O88704 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hcn1O88704 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Hcn1O88704 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hcn1O88704 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Hcn1O88704 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.79□□□□□ -0.36
Hcn1O88704 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Hcn1O88704 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hcn1O88704 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hcn1O88704 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hcn1O88704 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.79□□□□□ -0.36
Hcn1O88704 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hcn1O88704 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hcn1O88704 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hcn1O88704 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hcn1O88704 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hcn1O88704 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hcn1O88704 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.79□□□□□ -0.36
Hcn1O88704 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hcn1O88704 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hcn1O88704 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hcn1O88704 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hcn1O88704 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.78□□□□□ -0.36
Hcn1O88704 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hcn1O88704 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hcn1O88704 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hcn1O88704 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hcn1O88704 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hcn1O88704 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Hcn1O88704 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hcn1O88704 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.78□□□□□ -0.36
Hcn1O88704 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Hcn1O88704 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Hcn1O88704 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hcn1O88704 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.78□□□□□ -0.36
Hcn1O88704 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.78□□□□□ -0.36
Hcn1O88704 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.78□□□□□ -0.36
Hcn1O88704 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.78□□□□□ -0.36
Hcn1O88704 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.78□□□□□ -0.36
Hcn1O88704 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.78□□□□□ -0.36
Hcn1O88704 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hcn1O88704 Gm8927-201ENSMUST00000181978 981 ntBASIC12.78□□□□□ -0.36
Hcn1O88704 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Hcn1O88704 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.78□□□□□ -0.36
Hcn1O88704 Gm3222-201ENSMUST00000071282 990 ntBASIC12.78□□□□□ -0.36
Hcn1O88704 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hcn1O88704 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hcn1O88704 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Hcn1O88704 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Hcn1O88704 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hcn1O88704 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hcn1O88704 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hcn1O88704 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hcn1O88704 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.78□□□□□ -0.36
Hcn1O88704 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hcn1O88704 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hcn1O88704 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hcn1O88704 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hcn1O88704 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Hcn1O88704 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hcn1O88704 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hcn1O88704 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hcn1O88704 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hcn1O88704 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hcn1O88704 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hcn1O88704 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hcn1O88704 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hcn1O88704 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Hcn1O88704 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hcn1O88704 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Hcn1O88704 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hcn1O88704 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hcn1O88704 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hcn1O88704 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hcn1O88704 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.77□□□□□ -0.37
Hcn1O88704 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.77□□□□□ -0.37
Hcn1O88704 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.77□□□□□ -0.37
Hcn1O88704 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.77□□□□□ -0.37
Hcn1O88704 Gm28631-201ENSMUST00000190740 334 ntBASIC12.77□□□□□ -0.37
Hcn1O88704 Gm18905-201ENSMUST00000205454 928 ntBASIC12.77□□□□□ -0.37
Hcn1O88704 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.77□□□□□ -0.37
Hcn1O88704 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hcn1O88704 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hcn1O88704 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.77□□□□□ -0.37
Hcn1O88704 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Hcn1O88704 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Hcn1O88704 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms