Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 AC132384.14-201ENSMUST00000219346 1147 ntBASIC16.2■□□□□ 0.18
Cops6O88545 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Cops6O88545 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Cops6O88545 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cops6O88545 AC101945.2-201ENSMUST00000227886 1377 ntBASIC16.2■□□□□ 0.18
Cops6O88545 Gm15897-201ENSMUST00000117770 1486 ntBASIC16.2■□□□□ 0.18
Cops6O88545 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cops6O88545 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cops6O88545 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Cops6O88545 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cops6O88545 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cops6O88545 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cops6O88545 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cops6O88545 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Cops6O88545 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC16.2■□□□□ 0.18
Cops6O88545 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cops6O88545 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cops6O88545 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cops6O88545 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cops6O88545 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cops6O88545 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cops6O88545 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cops6O88545 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC16.19■□□□□ 0.18
Cops6O88545 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Cops6O88545 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cops6O88545 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cops6O88545 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Cops6O88545 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Cops6O88545 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Cops6O88545 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Cops6O88545 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Cops6O88545 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Cops6O88545 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Cops6O88545 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cops6O88545 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cops6O88545 Gm37489-201ENSMUST00000191883 159 ntBASIC16.19■□□□□ 0.18
Cops6O88545 Gm4857-201ENSMUST00000192718 785 ntBASIC16.19■□□□□ 0.18
Cops6O88545 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC16.19■□□□□ 0.18
Cops6O88545 Gm7118-201ENSMUST00000200167 1003 ntBASIC16.19■□□□□ 0.18
Cops6O88545 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC16.19■□□□□ 0.18
Cops6O88545 Gm32025-201ENSMUST00000217960 307 ntBASIC16.19■□□□□ 0.18
Cops6O88545 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cops6O88545 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cops6O88545 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Cops6O88545 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cops6O88545 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cops6O88545 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cops6O88545 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC16.18■□□□□ 0.18
Cops6O88545 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
Cops6O88545 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cops6O88545 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Cops6O88545 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cops6O88545 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cops6O88545 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC16.18■□□□□ 0.18
Cops6O88545 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cops6O88545 Gm10729-202ENSMUST00000193403 1375 ntBASIC16.18■□□□□ 0.18
Cops6O88545 Gm22323-201ENSMUST00000103832 109 ntBASIC16.18■□□□□ 0.18
Cops6O88545 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cops6O88545 Gm4986-201ENSMUST00000119731 549 ntBASIC16.18■□□□□ 0.18
Cops6O88545 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC16.18■□□□□ 0.18
Cops6O88545 Gm24548-201ENSMUST00000158650 108 ntBASIC16.18■□□□□ 0.18
Cops6O88545 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Cops6O88545 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Cops6O88545 Gm37259-201ENSMUST00000193903 849 ntBASIC16.18■□□□□ 0.18
Cops6O88545 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC16.18■□□□□ 0.18
Cops6O88545 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC16.18■□□□□ 0.18
Cops6O88545 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cops6O88545 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cops6O88545 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cops6O88545 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Cops6O88545 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cops6O88545 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cops6O88545 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cops6O88545 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cops6O88545 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC16.18■□□□□ 0.18
Cops6O88545 Gm21451-201ENSMUST00000111062 2775 ntBASIC16.18■□□□□ 0.18
Cops6O88545 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cops6O88545 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cops6O88545 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cops6O88545 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cops6O88545 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cops6O88545 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cops6O88545 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC16.17■□□□□ 0.18
Cops6O88545 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cops6O88545 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cops6O88545 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cops6O88545 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Cops6O88545 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Cops6O88545 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cops6O88545 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cops6O88545 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cops6O88545 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cops6O88545 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cops6O88545 Gm5781-201ENSMUST00000219792 443 ntBASIC16.17■□□□□ 0.18
Cops6O88545 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cops6O88545 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cops6O88545 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cops6O88545 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cops6O88545 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC16.17■□□□□ 0.18
Cops6O88545 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms