Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pde6dO55057 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pde6dO55057 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pde6dO55057 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pde6dO55057 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pde6dO55057 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Pde6dO55057 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pde6dO55057 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pde6dO55057 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pde6dO55057 BC001981-202ENSMUST00000191393 1545 ntBASIC10.5□□□□□ -0.73
Pde6dO55057 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pde6dO55057 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pde6dO55057 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pde6dO55057 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC10.5□□□□□ -0.73
Pde6dO55057 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC10.5□□□□□ -0.73
Pde6dO55057 Gm11543-201ENSMUST00000120758 370 ntBASIC10.5□□□□□ -0.73
Pde6dO55057 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pde6dO55057 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC10.5□□□□□ -0.73
Pde6dO55057 Mir7221-201ENSMUST00000184009 72 ntBASIC10.5□□□□□ -0.73
Pde6dO55057 Gm37714-201ENSMUST00000194742 342 ntBASIC10.5□□□□□ -0.73
Pde6dO55057 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pde6dO55057 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pde6dO55057 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Pde6dO55057 AC093022.5-201ENSMUST00000226841 1079 ntBASIC10.5□□□□□ -0.73
Pde6dO55057 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pde6dO55057 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pde6dO55057 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pde6dO55057 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pde6dO55057 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pde6dO55057 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Pde6dO55057 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC10.5□□□□□ -0.73
Pde6dO55057 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pde6dO55057 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pde6dO55057 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Pde6dO55057 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pde6dO55057 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC10.5□□□□□ -0.73
Pde6dO55057 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pde6dO55057 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pde6dO55057 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pde6dO55057 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Pde6dO55057 AC159195.1-201ENSMUST00000225867 2086 ntBASIC10.49□□□□□ -0.73
Pde6dO55057 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pde6dO55057 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pde6dO55057 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Pde6dO55057 Gm13722-201ENSMUST00000117964 3066 ntBASIC10.49□□□□□ -0.73
Pde6dO55057 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Pde6dO55057 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Pde6dO55057 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pde6dO55057 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pde6dO55057 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pde6dO55057 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pde6dO55057 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pde6dO55057 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pde6dO55057 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pde6dO55057 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pde6dO55057 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pde6dO55057 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Pde6dO55057 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pde6dO55057 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pde6dO55057 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pde6dO55057 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pde6dO55057 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pde6dO55057 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pde6dO55057 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pde6dO55057 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pde6dO55057 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Pde6dO55057 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC10.49□□□□□ -0.73
Pde6dO55057 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pde6dO55057 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC10.49□□□□□ -0.73
Pde6dO55057 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Pde6dO55057 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Pde6dO55057 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC10.49□□□□□ -0.73
Pde6dO55057 Gm6376-201ENSMUST00000209407 580 ntBASIC10.49□□□□□ -0.73
Pde6dO55057 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Pde6dO55057 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pde6dO55057 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Pde6dO55057 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
Pde6dO55057 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Pde6dO55057 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pde6dO55057 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Pde6dO55057 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pde6dO55057 Gm5989-201ENSMUST00000096092 2077 ntBASIC10.49□□□□□ -0.73
Pde6dO55057 Gm38187-201ENSMUST00000195609 4709 ntBASIC10.49□□□□□ -0.73
Pde6dO55057 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pde6dO55057 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pde6dO55057 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pde6dO55057 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Pde6dO55057 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Pde6dO55057 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pde6dO55057 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pde6dO55057 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Pde6dO55057 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC10.49□□□□□ -0.73
Pde6dO55057 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC10.49□□□□□ -0.73
Pde6dO55057 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Pde6dO55057 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pde6dO55057 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pde6dO55057 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pde6dO55057 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Pde6dO55057 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Pde6dO55057 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms