Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Smarce1O54941 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Smarce1O54941 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smarce1O54941 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Smarce1O54941 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smarce1O54941 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Smarce1O54941 Gm10305-201ENSMUST00000195331 2475 ntBASIC15.86■□□□□ 0.13
Smarce1O54941 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smarce1O54941 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smarce1O54941 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smarce1O54941 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Smarce1O54941 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
Smarce1O54941 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Smarce1O54941 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC15.86■□□□□ 0.13
Smarce1O54941 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Smarce1O54941 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smarce1O54941 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC15.86■□□□□ 0.13
Smarce1O54941 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Smarce1O54941 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smarce1O54941 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smarce1O54941 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smarce1O54941 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Smarce1O54941 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Smarce1O54941 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Smarce1O54941 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smarce1O54941 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Smarce1O54941 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smarce1O54941 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smarce1O54941 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smarce1O54941 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Smarce1O54941 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Smarce1O54941 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Smarce1O54941 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smarce1O54941 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smarce1O54941 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smarce1O54941 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Smarce1O54941 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smarce1O54941 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smarce1O54941 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC15.85■□□□□ 0.13
Smarce1O54941 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Smarce1O54941 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smarce1O54941 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Smarce1O54941 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Smarce1O54941 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Smarce1O54941 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Smarce1O54941 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Smarce1O54941 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC15.85■□□□□ 0.13
Smarce1O54941 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Smarce1O54941 Gm7775-201ENSMUST00000218871 853 ntBASIC15.85■□□□□ 0.13
Smarce1O54941 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smarce1O54941 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smarce1O54941 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC15.85■□□□□ 0.13
Smarce1O54941 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Smarce1O54941 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC15.85■□□□□ 0.13
Smarce1O54941 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Smarce1O54941 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smarce1O54941 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Smarce1O54941 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC15.85■□□□□ 0.13
Smarce1O54941 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Smarce1O54941 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
Smarce1O54941 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC15.85■□□□□ 0.13
Smarce1O54941 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarce1O54941 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Smarce1O54941 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarce1O54941 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Smarce1O54941 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Smarce1O54941 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC15.84■□□□□ 0.13
Smarce1O54941 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarce1O54941 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Smarce1O54941 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Smarce1O54941 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarce1O54941 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarce1O54941 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarce1O54941 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarce1O54941 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC15.84■□□□□ 0.13
Smarce1O54941 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC15.84■□□□□ 0.13
Smarce1O54941 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarce1O54941 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Smarce1O54941 Gm9063-201ENSMUST00000223299 582 ntBASIC15.84■□□□□ 0.13
Smarce1O54941 Gm24447-201ENSMUST00000083977 338 ntBASIC15.84■□□□□ 0.13
Smarce1O54941 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarce1O54941 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Smarce1O54941 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarce1O54941 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Smarce1O54941 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Smarce1O54941 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarce1O54941 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC15.84■□□□□ 0.13
Smarce1O54941 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC15.84■□□□□ 0.13
Smarce1O54941 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarce1O54941 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Smarce1O54941 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarce1O54941 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Smarce1O54941 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Smarce1O54941 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Smarce1O54941 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Smarce1O54941 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smarce1O54941 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Smarce1O54941 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Smarce1O54941 Gm23935-201ENSMUST00000102303 57 ntBASIC15.83■□□□□ 0.12
Smarce1O54941 Gm24270-201ENSMUST00000102326 57 ntBASIC15.83■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms