Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Matn3O35701 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Matn3O35701 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Matn3O35701 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Matn3O35701 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Matn3O35701 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Matn3O35701 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Matn3O35701 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Matn3O35701 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Matn3O35701 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Matn3O35701 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Matn3O35701 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Matn3O35701 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Matn3O35701 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Matn3O35701 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Matn3O35701 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Matn3O35701 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Matn3O35701 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.09□□□□□ -0.47
Matn3O35701 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Matn3O35701 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Matn3O35701 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Matn3O35701 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Matn3O35701 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Matn3O35701 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Matn3O35701 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Matn3O35701 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.09□□□□□ -0.47
Matn3O35701 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Matn3O35701 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Matn3O35701 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Matn3O35701 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.09□□□□□ -0.47
Matn3O35701 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Matn3O35701 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Matn3O35701 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Matn3O35701 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Matn3O35701 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Matn3O35701 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.09□□□□□ -0.47
Matn3O35701 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC12.09□□□□□ -0.47
Matn3O35701 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC12.09□□□□□ -0.47
Matn3O35701 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Matn3O35701 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC12.09□□□□□ -0.47
Matn3O35701 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Matn3O35701 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Matn3O35701 Mir497b-201ENSMUST00000093601 125 ntBASIC12.09□□□□□ -0.47
Matn3O35701 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC12.09□□□□□ -0.47
Matn3O35701 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.09□□□□□ -0.47
Matn3O35701 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Matn3O35701 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.09□□□□□ -0.47
Matn3O35701 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Matn3O35701 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Matn3O35701 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Matn3O35701 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Matn3O35701 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Matn3O35701 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Matn3O35701 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Matn3O35701 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Matn3O35701 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Matn3O35701 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Matn3O35701 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Matn3O35701 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Matn3O35701 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Matn3O35701 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Matn3O35701 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Matn3O35701 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Matn3O35701 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Matn3O35701 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Matn3O35701 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Matn3O35701 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
Matn3O35701 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.47
Matn3O35701 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Matn3O35701 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.47
Matn3O35701 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.08□□□□□ -0.48
Matn3O35701 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Matn3O35701 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Matn3O35701 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Matn3O35701 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Matn3O35701 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Matn3O35701 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Matn3O35701 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Matn3O35701 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Matn3O35701 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Matn3O35701 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Matn3O35701 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Matn3O35701 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Matn3O35701 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Matn3O35701 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Matn3O35701 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.08□□□□□ -0.48
Matn3O35701 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Matn3O35701 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Matn3O35701 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Matn3O35701 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Matn3O35701 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Matn3O35701 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Matn3O35701 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Matn3O35701 Mir7036b-201ENSMUST00000184791 63 ntBASIC12.08□□□□□ -0.48
Matn3O35701 Gm10576-201ENSMUST00000191927 825 ntBASIC12.08□□□□□ -0.48
Matn3O35701 Gm37714-201ENSMUST00000194742 342 ntBASIC12.08□□□□□ -0.48
Matn3O35701 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Matn3O35701 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.08□□□□□ -0.48
Matn3O35701 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Matn3O35701 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms