Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nr1i3O35627 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nr1i3O35627 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nr1i3O35627 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Nr1i3O35627 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nr1i3O35627 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nr1i3O35627 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nr1i3O35627 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Nr1i3O35627 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nr1i3O35627 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nr1i3O35627 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nr1i3O35627 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nr1i3O35627 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nr1i3O35627 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Nr1i3O35627 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Nr1i3O35627 Gm14719-201ENSMUST00000121891 340 ntBASIC14.33□□□□□ -0.12
Nr1i3O35627 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Nr1i3O35627 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Nr1i3O35627 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Nr1i3O35627 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nr1i3O35627 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.33□□□□□ -0.12
Nr1i3O35627 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.33□□□□□ -0.12
Nr1i3O35627 AC134335.2-201ENSMUST00000227660 440 ntBASIC14.33□□□□□ -0.12
Nr1i3O35627 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nr1i3O35627 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nr1i3O35627 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nr1i3O35627 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Nr1i3O35627 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Nr1i3O35627 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nr1i3O35627 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Nr1i3O35627 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Nr1i3O35627 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.33□□□□□ -0.12
Nr1i3O35627 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1i3O35627 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1i3O35627 Gm44401-201ENSMUST00000204462 2375 ntBASIC14.32□□□□□ -0.12
Nr1i3O35627 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1i3O35627 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1i3O35627 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1i3O35627 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1i3O35627 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1i3O35627 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1i3O35627 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1i3O35627 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1i3O35627 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Nr1i3O35627 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1i3O35627 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1i3O35627 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1i3O35627 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC14.32□□□□□ -0.12
Nr1i3O35627 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1i3O35627 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14.32□□□□□ -0.12
Nr1i3O35627 Gm44872-201ENSMUST00000207864 420 ntBASIC14.32□□□□□ -0.12
Nr1i3O35627 AC073947.2-201ENSMUST00000215888 1130 ntBASIC14.32□□□□□ -0.12
Nr1i3O35627 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1i3O35627 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Nr1i3O35627 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1i3O35627 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC14.32□□□□□ -0.12
Nr1i3O35627 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1i3O35627 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1i3O35627 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Nr1i3O35627 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1i3O35627 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Nr1i3O35627 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1i3O35627 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1i3O35627 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1i3O35627 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.32□□□□□ -0.12
Nr1i3O35627 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Nr1i3O35627 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1i3O35627 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1i3O35627 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1i3O35627 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Nr1i3O35627 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1i3O35627 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1i3O35627 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1i3O35627 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Nr1i3O35627 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nr1i3O35627 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nr1i3O35627 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nr1i3O35627 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nr1i3O35627 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Nr1i3O35627 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nr1i3O35627 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nr1i3O35627 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nr1i3O35627 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nr1i3O35627 Mbnl2-204ENSMUST00000227012 2390 ntBASIC14.31□□□□□ -0.12
Nr1i3O35627 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nr1i3O35627 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nr1i3O35627 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nr1i3O35627 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Nr1i3O35627 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nr1i3O35627 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nr1i3O35627 Gm27194-201ENSMUST00000175753 2936 ntBASIC14.31□□□□□ -0.12
Nr1i3O35627 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nr1i3O35627 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Nr1i3O35627 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Nr1i3O35627 Gm22189-201ENSMUST00000103822 86 ntBASIC14.31□□□□□ -0.12
Nr1i3O35627 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.31□□□□□ -0.12
Nr1i3O35627 Gm11400-201ENSMUST00000120853 1214 ntBASIC14.31□□□□□ -0.12
Nr1i3O35627 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.31□□□□□ -0.12
Nr1i3O35627 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Nr1i3O35627 Kcnk16-202ENSMUST00000225596 2127 ntBASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms