Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Npc1O35604 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.02□□□□□ -0.33
Npc1O35604 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Npc1O35604 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Npc1O35604 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Npc1O35604 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Npc1O35604 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Npc1O35604 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Npc1O35604 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Npc1O35604 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Npc1O35604 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Npc1O35604 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Npc1O35604 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Npc1O35604 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Npc1O35604 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Npc1O35604 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Npc1O35604 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Npc1O35604 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Npc1O35604 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Npc1O35604 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Npc1O35604 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Npc1O35604 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Npc1O35604 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Npc1O35604 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Npc1O35604 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Npc1O35604 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.01□□□□□ -0.33
Npc1O35604 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Npc1O35604 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Npc1O35604 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Npc1O35604 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Npc1O35604 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Npc1O35604 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Npc1O35604 Gm15824-201ENSMUST00000119516 955 ntBASIC13.01□□□□□ -0.33
Npc1O35604 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.01□□□□□ -0.33
Npc1O35604 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.01□□□□□ -0.33
Npc1O35604 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.01□□□□□ -0.33
Npc1O35604 Gm8602-201ENSMUST00000184045 607 ntBASIC13.01□□□□□ -0.33
Npc1O35604 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.01□□□□□ -0.33
Npc1O35604 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Npc1O35604 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.01□□□□□ -0.33
Npc1O35604 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.01□□□□□ -0.33
Npc1O35604 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.01□□□□□ -0.33
Npc1O35604 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Npc1O35604 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Npc1O35604 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Npc1O35604 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Npc1O35604 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Npc1O35604 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Npc1O35604 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Npc1O35604 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Npc1O35604 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Npc1O35604 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Npc1O35604 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Npc1O35604 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Npc1O35604 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Npc1O35604 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Npc1O35604 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Npc1O35604 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Npc1O35604 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Npc1O35604 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Npc1O35604 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Npc1O35604 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Npc1O35604 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Npc1O35604 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13□□□□□ -0.33
Npc1O35604 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13□□□□□ -0.33
Npc1O35604 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13□□□□□ -0.33
Npc1O35604 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Npc1O35604 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13□□□□□ -0.33
Npc1O35604 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Npc1O35604 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Npc1O35604 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC13□□□□□ -0.33
Npc1O35604 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Npc1O35604 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Npc1O35604 Gm5912-201ENSMUST00000122282 1438 ntBASIC13□□□□□ -0.33
Npc1O35604 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Npc1O35604 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Npc1O35604 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Npc1O35604 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13□□□□□ -0.33
Npc1O35604 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Npc1O35604 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13□□□□□ -0.33
Npc1O35604 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Npc1O35604 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13□□□□□ -0.33
Npc1O35604 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Npc1O35604 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Npc1O35604 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Npc1O35604 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Npc1O35604 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13□□□□□ -0.33
Npc1O35604 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Npc1O35604 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Npc1O35604 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13□□□□□ -0.33
Npc1O35604 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13□□□□□ -0.33
Npc1O35604 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13□□□□□ -0.33
Npc1O35604 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Npc1O35604 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Npc1O35604 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Npc1O35604 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Npc1O35604 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Npc1O35604 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Npc1O35604 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Npc1O35604 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms