Protein–RNA interactions for Protein: O35089

Cnih2, Protein cornichon homolog 2, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnih2O35089 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cnih2O35089 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cnih2O35089 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cnih2O35089 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Cnih2O35089 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Cnih2O35089 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.74□□□□□ -0.53
Cnih2O35089 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Cnih2O35089 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cnih2O35089 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cnih2O35089 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cnih2O35089 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cnih2O35089 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cnih2O35089 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cnih2O35089 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cnih2O35089 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cnih2O35089 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cnih2O35089 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.73□□□□□ -0.53
Cnih2O35089 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cnih2O35089 Mir698-201ENSMUST00000102164 109 ntBASIC11.73□□□□□ -0.53
Cnih2O35089 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Cnih2O35089 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cnih2O35089 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cnih2O35089 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Cnih2O35089 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cnih2O35089 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.73□□□□□ -0.53
Cnih2O35089 Gm13823-201ENSMUST00000119930 345 ntBASIC11.73□□□□□ -0.53
Cnih2O35089 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cnih2O35089 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cnih2O35089 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cnih2O35089 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cnih2O35089 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cnih2O35089 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cnih2O35089 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC11.73□□□□□ -0.53
Cnih2O35089 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cnih2O35089 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC11.73□□□□□ -0.53
Cnih2O35089 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC11.73□□□□□ -0.53
Cnih2O35089 Gm18737-201ENSMUST00000173594 937 ntBASIC11.73□□□□□ -0.53
Cnih2O35089 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.73□□□□□ -0.53
Cnih2O35089 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
Cnih2O35089 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cnih2O35089 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cnih2O35089 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cnih2O35089 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cnih2O35089 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cnih2O35089 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Cnih2O35089 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cnih2O35089 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cnih2O35089 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Cnih2O35089 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC11.73□□□□□ -0.53
Cnih2O35089 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cnih2O35089 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cnih2O35089 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.73□□□□□ -0.53
Cnih2O35089 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Cnih2O35089 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cnih2O35089 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cnih2O35089 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cnih2O35089 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cnih2O35089 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cnih2O35089 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cnih2O35089 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.72□□□□□ -0.53
Cnih2O35089 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Cnih2O35089 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cnih2O35089 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cnih2O35089 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cnih2O35089 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cnih2O35089 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cnih2O35089 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cnih2O35089 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cnih2O35089 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cnih2O35089 Gm12892-201ENSMUST00000117367 1146 ntBASIC11.72□□□□□ -0.53
Cnih2O35089 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Cnih2O35089 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Cnih2O35089 AA619741-201ENSMUST00000195095 646 ntBASIC11.72□□□□□ -0.53
Cnih2O35089 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cnih2O35089 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC11.72□□□□□ -0.53
Cnih2O35089 AC090659.1-201ENSMUST00000224334 768 ntBASIC11.72□□□□□ -0.53
Cnih2O35089 AC132467.2-202ENSMUST00000227726 559 ntBASIC11.72□□□□□ -0.53
Cnih2O35089 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cnih2O35089 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cnih2O35089 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cnih2O35089 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cnih2O35089 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cnih2O35089 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cnih2O35089 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cnih2O35089 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cnih2O35089 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cnih2O35089 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cnih2O35089 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cnih2O35089 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Cnih2O35089 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cnih2O35089 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cnih2O35089 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cnih2O35089 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.71□□□□□ -0.53
Cnih2O35089 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.71□□□□□ -0.53
Cnih2O35089 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.71□□□□□ -0.53
Cnih2O35089 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cnih2O35089 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC11.71□□□□□ -0.53
Cnih2O35089 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cnih2O35089 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Cnih2O35089 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms