Protein–RNA interactions for Protein: O09039

Sh2b3, SH2B adapter protein 3, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2b3O09039 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sh2b3O09039 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sh2b3O09039 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sh2b3O09039 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Sh2b3O09039 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sh2b3O09039 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sh2b3O09039 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sh2b3O09039 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sh2b3O09039 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sh2b3O09039 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC11.87□□□□□ -0.51
Sh2b3O09039 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sh2b3O09039 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sh2b3O09039 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sh2b3O09039 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sh2b3O09039 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sh2b3O09039 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sh2b3O09039 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sh2b3O09039 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Sh2b3O09039 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sh2b3O09039 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sh2b3O09039 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sh2b3O09039 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sh2b3O09039 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC11.87□□□□□ -0.51
Sh2b3O09039 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sh2b3O09039 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sh2b3O09039 Gm12485-201ENSMUST00000119641 291 ntBASIC11.87□□□□□ -0.51
Sh2b3O09039 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.87□□□□□ -0.51
Sh2b3O09039 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC11.87□□□□□ -0.51
Sh2b3O09039 Gm6007-201ENSMUST00000208170 823 ntBASIC11.87□□□□□ -0.51
Sh2b3O09039 Gm8463-201ENSMUST00000208573 613 ntBASIC11.87□□□□□ -0.51
Sh2b3O09039 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sh2b3O09039 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sh2b3O09039 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sh2b3O09039 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Sh2b3O09039 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sh2b3O09039 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sh2b3O09039 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sh2b3O09039 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sh2b3O09039 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sh2b3O09039 Gm18244-201ENSMUST00000219747 1566 ntBASIC11.87□□□□□ -0.51
Sh2b3O09039 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sh2b3O09039 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
Sh2b3O09039 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Sh2b3O09039 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sh2b3O09039 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sh2b3O09039 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sh2b3O09039 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Sh2b3O09039 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sh2b3O09039 Gm8775-201ENSMUST00000170943 1327 ntBASIC11.86□□□□□ -0.51
Sh2b3O09039 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sh2b3O09039 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sh2b3O09039 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sh2b3O09039 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC11.86□□□□□ -0.51
Sh2b3O09039 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sh2b3O09039 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sh2b3O09039 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sh2b3O09039 AL645783.1-201ENSMUST00000221416 1832 ntBASIC11.86□□□□□ -0.51
Sh2b3O09039 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC11.86□□□□□ -0.51
Sh2b3O09039 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sh2b3O09039 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sh2b3O09039 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Sh2b3O09039 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sh2b3O09039 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC11.86□□□□□ -0.51
Sh2b3O09039 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sh2b3O09039 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sh2b3O09039 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sh2b3O09039 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sh2b3O09039 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC11.86□□□□□ -0.51
Sh2b3O09039 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sh2b3O09039 Gm12957-201ENSMUST00000117835 377 ntBASIC11.86□□□□□ -0.51
Sh2b3O09039 Gm15376-201ENSMUST00000122258 783 ntBASIC11.86□□□□□ -0.51
Sh2b3O09039 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC11.86□□□□□ -0.51
Sh2b3O09039 Gm26464-201ENSMUST00000157094 305 ntBASIC11.86□□□□□ -0.51
Sh2b3O09039 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC11.86□□□□□ -0.51
Sh2b3O09039 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC11.86□□□□□ -0.51
Sh2b3O09039 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sh2b3O09039 Gm27847-201ENSMUST00000183711 107 ntBASIC11.86□□□□□ -0.51
Sh2b3O09039 Gm27375-201ENSMUST00000183799 107 ntBASIC11.86□□□□□ -0.51
Sh2b3O09039 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sh2b3O09039 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC11.86□□□□□ -0.51
Sh2b3O09039 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.86□□□□□ -0.51
Sh2b3O09039 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC11.86□□□□□ -0.51
Sh2b3O09039 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sh2b3O09039 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sh2b3O09039 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sh2b3O09039 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sh2b3O09039 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Sh2b3O09039 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sh2b3O09039 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sh2b3O09039 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sh2b3O09039 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sh2b3O09039 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sh2b3O09039 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sh2b3O09039 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sh2b3O09039 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Sh2b3O09039 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC11.86□□□□□ -0.51
Sh2b3O09039 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Sh2b3O09039 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Sh2b3O09039 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Sh2b3O09039 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms