Protein–RNA interactions for Protein: O08604

Raet1c, Retinoic acid early-inducible protein 1-gamma, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1cO08604 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Raet1cO08604 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.92□□□□□ -0.5
Raet1cO08604 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Raet1cO08604 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Raet1cO08604 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Raet1cO08604 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Raet1cO08604 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Raet1cO08604 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC11.92□□□□□ -0.5
Raet1cO08604 Mir6977-201ENSMUST00000184960 64 ntBASIC11.92□□□□□ -0.5
Raet1cO08604 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Raet1cO08604 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Raet1cO08604 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Raet1cO08604 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Raet1cO08604 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Raet1cO08604 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Raet1cO08604 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Raet1cO08604 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Raet1cO08604 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Raet1cO08604 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Raet1cO08604 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Raet1cO08604 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Raet1cO08604 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Raet1cO08604 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Raet1cO08604 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Raet1cO08604 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Raet1cO08604 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Raet1cO08604 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Raet1cO08604 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Raet1cO08604 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Raet1cO08604 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.92□□□□□ -0.5
Raet1cO08604 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Raet1cO08604 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Raet1cO08604 Gm21038-201ENSMUST00000222205 1383 ntBASIC11.92□□□□□ -0.5
Raet1cO08604 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC11.92□□□□□ -0.5
Raet1cO08604 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Raet1cO08604 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Raet1cO08604 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.91□□□□□ -0.5
Raet1cO08604 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC11.91□□□□□ -0.5
Raet1cO08604 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Raet1cO08604 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Raet1cO08604 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.91□□□□□ -0.5
Raet1cO08604 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Raet1cO08604 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Raet1cO08604 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Raet1cO08604 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Raet1cO08604 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Raet1cO08604 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Raet1cO08604 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Raet1cO08604 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Raet1cO08604 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Raet1cO08604 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Raet1cO08604 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Raet1cO08604 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Raet1cO08604 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Raet1cO08604 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC11.91□□□□□ -0.5
Raet1cO08604 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC11.91□□□□□ -0.5
Raet1cO08604 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Raet1cO08604 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Raet1cO08604 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Raet1cO08604 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Raet1cO08604 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Raet1cO08604 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Raet1cO08604 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Raet1cO08604 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Raet1cO08604 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.91□□□□□ -0.5
Raet1cO08604 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.91□□□□□ -0.5
Raet1cO08604 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Raet1cO08604 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Raet1cO08604 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Raet1cO08604 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Raet1cO08604 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Raet1cO08604 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Raet1cO08604 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Raet1cO08604 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Raet1cO08604 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.91□□□□□ -0.5
Raet1cO08604 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Raet1cO08604 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.9□□□□□ -0.5
Raet1cO08604 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC11.9□□□□□ -0.5
Raet1cO08604 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC11.9□□□□□ -0.5
Raet1cO08604 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Raet1cO08604 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Raet1cO08604 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.9□□□□□ -0.5
Raet1cO08604 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Raet1cO08604 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Raet1cO08604 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Raet1cO08604 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Raet1cO08604 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Raet1cO08604 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Raet1cO08604 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Raet1cO08604 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Raet1cO08604 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Raet1cO08604 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
Raet1cO08604 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC11.9□□□□□ -0.5
Raet1cO08604 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Raet1cO08604 Gm19220-201ENSMUST00000222682 803 ntBASIC11.9□□□□□ -0.5
Raet1cO08604 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC11.9□□□□□ -0.5
Raet1cO08604 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC11.9□□□□□ -0.5
Raet1cO08604 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Raet1cO08604 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Raet1cO08604 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms