Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ccdc180J3QNE4 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ccdc180J3QNE4 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ccdc180J3QNE4 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ccdc180J3QNE4 Gm43947-201ENSMUST00000203019 959 ntBASIC23.9■■□□□ 1.42
Ccdc180J3QNE4 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ccdc180J3QNE4 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Ccdc180J3QNE4 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
Ccdc180J3QNE4 Gm10702-201ENSMUST00000098929 1268 ntBASIC23.9■■□□□ 1.42
Ccdc180J3QNE4 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC23.9■■□□□ 1.42
Ccdc180J3QNE4 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
Ccdc180J3QNE4 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ccdc180J3QNE4 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC23.9■■□□□ 1.42
Ccdc180J3QNE4 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
Ccdc180J3QNE4 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ccdc180J3QNE4 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ccdc180J3QNE4 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ccdc180J3QNE4 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
Ccdc180J3QNE4 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
Ccdc180J3QNE4 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
Ccdc180J3QNE4 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC23.89■■□□□ 1.42
Ccdc180J3QNE4 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC23.89■■□□□ 1.42
Ccdc180J3QNE4 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC23.89■■□□□ 1.42
Ccdc180J3QNE4 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Ccdc180J3QNE4 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC23.89■■□□□ 1.42
Ccdc180J3QNE4 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC23.89■■□□□ 1.42
Ccdc180J3QNE4 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Ccdc180J3QNE4 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Ccdc180J3QNE4 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Ccdc180J3QNE4 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Ccdc180J3QNE4 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Ccdc180J3QNE4 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Ccdc180J3QNE4 Gm25700-201ENSMUST00000177693 110 ntBASIC23.89■■□□□ 1.41
Ccdc180J3QNE4 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Ccdc180J3QNE4 Gm45691-201ENSMUST00000206905 1120 ntBASIC23.89■■□□□ 1.41
Ccdc180J3QNE4 Gm44967-201ENSMUST00000207047 631 ntBASIC23.89■■□□□ 1.41
Ccdc180J3QNE4 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC23.89■■□□□ 1.41
Ccdc180J3QNE4 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Ccdc180J3QNE4 Gm39404-201ENSMUST00000216350 313 ntBASIC23.89■■□□□ 1.41
Ccdc180J3QNE4 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC23.89■■□□□ 1.41
Ccdc180J3QNE4 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Ccdc180J3QNE4 AC159649.2-201ENSMUST00000222984 3223 ntBASIC23.89■■□□□ 1.41
Ccdc180J3QNE4 Gm5639-201ENSMUST00000122305 2403 ntBASIC23.88■■□□□ 1.41
Ccdc180J3QNE4 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ccdc180J3QNE4 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ccdc180J3QNE4 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
Ccdc180J3QNE4 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
Ccdc180J3QNE4 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ccdc180J3QNE4 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ccdc180J3QNE4 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ccdc180J3QNE4 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ccdc180J3QNE4 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC23.88■■□□□ 1.41
Ccdc180J3QNE4 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC23.88■■□□□ 1.41
Ccdc180J3QNE4 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC23.88■■□□□ 1.41
Ccdc180J3QNE4 Gm12502-201ENSMUST00000120197 444 ntBASIC23.88■■□□□ 1.41
Ccdc180J3QNE4 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Ccdc180J3QNE4 Gm16296-201ENSMUST00000159905 325 ntBASIC23.88■■□□□ 1.41
Ccdc180J3QNE4 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Ccdc180J3QNE4 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
Ccdc180J3QNE4 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC23.88■■□□□ 1.41
Ccdc180J3QNE4 Gm45224-201ENSMUST00000208203 414 ntBASIC23.88■■□□□ 1.41
Ccdc180J3QNE4 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC23.88■■□□□ 1.41
Ccdc180J3QNE4 Gm18212-201ENSMUST00000211678 889 ntBASIC23.88■■□□□ 1.41
Ccdc180J3QNE4 Abhd11os-203ENSMUST00000222613 363 ntBASIC23.88■■□□□ 1.41
Ccdc180J3QNE4 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ccdc180J3QNE4 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ccdc180J3QNE4 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
Ccdc180J3QNE4 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ccdc180J3QNE4 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ccdc180J3QNE4 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ccdc180J3QNE4 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ccdc180J3QNE4 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ccdc180J3QNE4 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Ccdc180J3QNE4 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ccdc180J3QNE4 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ccdc180J3QNE4 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC23.87■■□□□ 1.41
Ccdc180J3QNE4 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ccdc180J3QNE4 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC23.87■■□□□ 1.41
Ccdc180J3QNE4 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Ccdc180J3QNE4 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Ccdc180J3QNE4 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ccdc180J3QNE4 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ccdc180J3QNE4 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC23.87■■□□□ 1.41
Ccdc180J3QNE4 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ccdc180J3QNE4 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ccdc180J3QNE4 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC23.86■■□□□ 1.41
Ccdc180J3QNE4 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
Ccdc180J3QNE4 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC23.86■■□□□ 1.41
Ccdc180J3QNE4 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC23.86■■□□□ 1.41
Ccdc180J3QNE4 Gm5904-201ENSMUST00000210286 865 ntBASIC23.86■■□□□ 1.41
Ccdc180J3QNE4 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC23.86■■□□□ 1.41
Ccdc180J3QNE4 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
Ccdc180J3QNE4 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Ccdc180J3QNE4 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Ccdc180J3QNE4 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ccdc180J3QNE4 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ccdc180J3QNE4 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
Ccdc180J3QNE4 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC23.86■■□□□ 1.41
Ccdc180J3QNE4 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ccdc180J3QNE4 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms